RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Inpp5dQ9ES52 1191 aa19.37■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Nwd1A6H603 1563 aa19.37■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Myt1Q8CFC2 1127 aa19.36■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Atp1b4Q99ME6 356 aa19.36■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Cps1Q8C196 1500 aa19.36■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Txndc2Q6P902 515 aa19.36■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Wwc2Q6NXJ0 1187 aa19.35■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Psme1P97371 249 aa19.34■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Mrs2Q5NCE8 434 aa19.34■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Pik3r4Q8VD65 1358 aa19.34■□□□□ 0.69
Ssr1-204ENSMUST00000225319 NktrP30415 1453 aa19.34■□□□□ 0.69
Ssr1-204ENSMUST00000225319 P3h3Q8CG70 732 aa19.33■□□□□ 0.69
Ssr1-204ENSMUST00000225319 Topaz1E5FYH1 1653 aa19.33■□□□□ 0.69
Ssr1-204ENSMUST00000225319 PzpQ61838 1495 aa19.33■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Gprasp1Q5U4C1 1347 aa19.32■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Calr4Q3TQS0 420 aa19.32■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Stk26Q99JT2 416 aa19.32■□□□□ 0.68
Ssr1-204ENSMUST00000225319 IghaA0A0A6YXW6 389 aa19.31■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Utp14aQ640M1 767 aaKnown RBP19.31■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Tex14Q7M6U3 1450 aa19.3■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Slc4a2P13808 1237 aaKnown RBP19.29■□□□□ 0.68
Ssr1-204ENSMUST00000225319 KdrP35918 1367 aa19.29■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Asxl2Q8BZ32 1370 aa19.28■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Nrxn1Q9CS84 1514 aa19.28■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Anp32bQ9EST5 272 aaKnown RBP19.28■□□□□ 0.68
Ssr1-204ENSMUST00000225319 GphnQ8BUV3 769 aaKnown RBP19.27■□□□□ 0.68
Ssr1-204ENSMUST00000225319 Anp32aO35381 247 aa19.26■□□□□ 0.67
Ssr1-204ENSMUST00000225319 NrdcQ8BHG1 1161 aa19.26■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Usp32F8VPZ3 1604 aa19.24■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Atp2b2Q9R0K7 1198 aa19.24■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Adgrl1Q80TR1 1466 aa19.23■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Mink1Q9JM52 1308 aa19.22■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Rab3gap2Q8BMG7 1366 aa19.22■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Rimbp3Q3V0F0 1606 aa19.21■□□□□ 0.67
Ssr1-204ENSMUST00000225319 Gsto1O09131 240 aa19.2■□□□□ 0.66
Ssr1-204ENSMUST00000225319 MyclP10166 368 aa19.2■□□□□ 0.66
Ssr1-204ENSMUST00000225319 FanciQ8K368 1330 aa19.19■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Rpgrip1lQ8CG73 1264 aa19.19■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Kif7B7ZNG0 1348 aa19.18■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Pik3c2bE9QAN8 1632 aa19.18■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Ppp2r1aQ76MZ3 589 aa19.18■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Cdk19Q8BWD8 501 aa19.18■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Exosc9Q9JHI7 438 aaKnown RBP19.17■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Med1Q925J9 1575 aa19.16■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Atf7ipQ7TT18 1306 aa19.16■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Rreb1Q3UH06 1700 aaKnown RBP19.16■□□□□ 0.66
Ssr1-204ENSMUST00000225319 MlecQ6ZQI3 291 aaKnown RBP19.16■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Cnga1P29974 684 aa19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Dcaf11Q91VU6 549 aa19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Rims2Q9EQZ7 1530 aa19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 D430041D05RikF6ZGR6 1678 aa19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Tnrc6bQ8BKI2 1810 aaKnown RBP19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Scaf11E9PZM7 1456 aaKnown RBP19.15■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Zscan21Q07231 555 aa19.14■□□□□ 0.66
Ssr1-204ENSMUST00000225319 Phlpp1Q8CHE4 1687 aa19.14■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Kif20bQ80WE4 1774 aaKnown RBP19.13■□□□□ 0.65
Ssr1-204ENSMUST00000225319 PtpruB1AUH1 1446 aa19.12■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Fam71e1A1L3C1 212 aa19.12■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Sirt1Q923E4 737 aa19.12■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Q7TT23 1179 aa19.11■□□□□ 0.65
Ssr1-204ENSMUST00000225319 HnrnpmQ9D0E1 729 aaKnown RBP19.11■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Thsd7aQ69ZU6 1645 aa19.1■□□□□ 0.65
Ssr1-204ENSMUST00000225319 N4bp2F8VQG7 1678 aaKnown RBP19.09■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Als2Q920R0 1651 aa19.09■□□□□ 0.65
Ssr1-204ENSMUST00000225319 C5P06684 1680 aa19.08■□□□□ 0.65
Ssr1-204ENSMUST00000225319 Zranb1Q7M760 708 aa19.07■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Map3k19E9Q3S4 1311 aa19.07■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Eif5bQ05D44 1216 aaKnown RBP19.06■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Idi2Q8BFZ6 227 aa19.05■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Nrxn3Q6P9K9 1571 aa19.05■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Unc13bQ9Z1N9 1602 aa19.05■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Q3UJC8 639 aa19.04■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Kif1aP33173 1695 aa19.04■□□□□ 0.64
Ssr1-204ENSMUST00000225319 NinlQ6ZQ12 1394 aa19.04■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Brwd3A2AHJ4 1799 aa19.04■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Mon2Q80TL7 1715 aa19.03■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Cald1E9QA15 768 aaKnown RBP19.02■□□□□ 0.64
Ssr1-204ENSMUST00000225319 Mak16Q8BGS0 296 aaKnown RBP19.01■□□□□ 0.63
Ssr1-204ENSMUST00000225319 IbtkQ6ZPR6 1352 aaKnown RBP19.01■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Abcc10Q8R4P9 1501 aa19.01■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Iqsec2Q5DU25 1478 aa19■□□□□ 0.63
Ssr1-204ENSMUST00000225319 CatipB9EKE5 520 aa19■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Nolc1E9Q5C9 702 aaKnown RBP19■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Wdr43Q6ZQL4 677 aaKnown RBP19■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Ofd1Q80Z25 1017 aa18.99■□□□□ 0.63
Ssr1-204ENSMUST00000225319 NalcnQ8BXR5 1738 aa18.98■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Col14a1Q80X19 1797 aa18.98■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Znf335A2A5K6 1337 aa18.97■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Tns3Q5SSZ5 1440 aa18.97■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Kiaa1107Q80TK0 1369 aa18.96■□□□□ 0.63
Ssr1-204ENSMUST00000225319 C3P01027 1663 aa18.96■□□□□ 0.63
Ssr1-204ENSMUST00000225319 Nlrp6Q91WS2 869 aa18.95■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Rtl5Q5DTT4 599 aa18.93■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Mdc1Q5PSV9 1707 aa18.93■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Chd4Q6PDQ2 1915 aaKnown RBP18.92■□□□□ 0.62
Ssr1-204ENSMUST00000225319 P2rx7Q9Z1M0 595 aa18.92■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Scn4aQ9ER60 1841 aa18.92■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Prdm10Q3UTQ7 1184 aa18.91■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Ppp4r2Q0VGB7 417 aa18.9■□□□□ 0.62
Ssr1-204ENSMUST00000225319 Usp19Q3UJD6 1360 aa18.89■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms