RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Ttll5Q8CHB8 1328 aa11.12□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Mfap1aC0HKD8 439 aaKnown RBP11.12□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Mfap1bC0HKD9 439 aaKnown RBP11.12□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Mrvi1Q9WUX5 899 aaKnown RBP11.12□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Tspyl2Q7TQI8 677 aa11.12□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 CrbnQ8C7D2 445 aa11.11□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Naip5Q9R016 1403 aa11.11□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 U2af2P26369 475 aaKnown RBP11.11□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Pnma3Q8JZW8 466 aa11.11□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Kiaa1210E9Q0C6 1637 aa11.1□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Abca8bQ8K440 1620 aa11.1□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Ncoa1P70365 1447 aa11.1□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Mak16Q8BGS0 296 aaKnown RBP11.1□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 TnikP83510 1323 aa11.1□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Rnf17Q99MV7 1640 aa11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Pde4cQ3UEI1 686 aa11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 IqubQ8CDK3 788 aa11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Nsfl1cQ9CZ44 370 aaKnown RBP11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Ak9G3UYQ4 1894 aa11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Cul7Q8VE73 1689 aa11.09□□□□□ -0.63
Prpf40a-208ENSMUST00000210789 Usp47Q8BY87 1376 aa11.08□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Dmrtc1Q9D9R7 182 aa11.08□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rnf214Q8BFU3 668 aaKnown RBP11.08□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rwdd1Q9CQK7 243 aa11.08□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Arhgap4B1AUY3 965 aa11.07□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Pnmal2G3X9N3 661 aa11.07□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Irx2P81066 474 aa11.07□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 OvosQ3UU35 1456 aa11.07□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Kcng1A2BDX4 514 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rbm27Q5SFM8 1060 aaKnown RBP11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Dennd4bQ3U1Y4 1499 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Adgrl2Q8JZZ7 1487 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rabep1O35551 862 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Neurod2Q62414 383 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 SphkapQ6NSW3 1687 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Col17a1Q07563 1470 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Wdr78E9PYY5 807 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Ssh2Q5SW75 1423 aa11.06□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Speer4f2E9Q366 295 aa11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Kiaa0754Q69ZZ9 979 aa11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Znf771Q8BJ90 317 aa11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rps6ka5Q8C050 863 aa11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Dhx9O70133 1380 aaKnown RBP11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Grwd1Q810D6 446 aaKnown RBP11.05□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Zscan21Q07231 555 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Os9Q8K2C7 672 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 FanciQ8K368 1330 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Fmn2Q9JL04 1578 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Zfyve16Q80U44 1528 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 1700017N19RikA0A087WPJ1 469 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Fez1Q8K0X8 392 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Mbd3Q9Z2D8 285 aaKnown RBP11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Mapk8ip3Q9ESN9 1337 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Terf2O35144 541 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Ddit3P35639 168 aa11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Rbm42Q91V81 474 aaKnown RBP11.04□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Gm32742A0A1B0GT42 1604 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 NcapgE9PWG6 1004 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Cd109Q8R422 1442 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Sparcl1P70663 650 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Gtpbp4Q99ME9 634 aaKnown RBP11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Anapc15-psA0A140T8L6 141 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Abcc3B2RX12 1523 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 AlkP97793 1621 aa11.03□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Pdcl2Q78Y63 240 aa11.02□□□□□ -0.64
Prpf40a-208ENSMUST00000210789 Polr3glQ8R0C0 218 aa11.02□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Depdc5P61460 1591 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Zfp251Q6PCX8 632 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 RbsnQ80Y56 783 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Cluap1Q8R3P7 413 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Stk24Q99KH8 431 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Grpel1Q99LP6 217 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Gtf3c6Q9D8P7 227 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Nsd2Q8BVE8 1365 aa11.01□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Cavin1O54724 392 aa11□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Rangap1P46061 589 aaKnown RBP11□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Pank1Q8K4K6 548 aa11□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Capn2O08529 700 aa11□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Mindy4Q3UQI9 744 aa11□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Setbp1Q9Z180 1582 aa10.99□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Stk11ipQ3TAA7 1072 aa10.99□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Isy1Q69ZQ2 285 aaKnown RBP10.99□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Brpf1B2RRD7 1212 aa10.99□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Pprc1Q6NZN1 1644 aa10.98□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Fam177a1Q8BR63 207 aa10.98□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Tmx3Q8BXZ1 456 aa10.98□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Ptch1Q61115 1434 aa10.97□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Myom3A2ABU4 1439 aa10.97□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Ptgs1P22437 602 aa10.97□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Ppp6r1Q7TSI3 856 aa10.97□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Rprd2Q6NXI6 1469 aaKnown RBP10.97□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Zbtb38Q3LR78 1197 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Rlbp1Q9Z275 317 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Nfatc2ipO09130 412 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Tmc1Q8R4P5 757 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Tmx1Q8VBT0 278 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Ccdc96Q9CR92 584 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Camsap2Q8C1B1 1461 aa10.96□□□□□ -0.65
Prpf40a-208ENSMUST00000210789 Mast1Q9R1L5 1570 aa10.96□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Zscan25B2RX31 543 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms