RNA–Protein interactions for RNA: ENSMUST00000199420.4

Csde1-215, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-215ENSMUST00000199420 Clstn2Q9ER65 966 aa7.25□□□□□ -1.25
Csde1-215ENSMUST00000199420 Sin3aQ60520 1274 aaKnown RBP7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Fez2Q6TYB5 348 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Trappc8E9PWG2 1437 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Marf1Q8BJ34 1730 aaKnown RBP7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Ccdc173A0JLY1 547 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Lmtk3Q5XJV6 1424 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Fam163aQ8CAA5 168 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Trim26Q99PN3 545 aa7.24□□□□□ -1.25
Csde1-215ENSMUST00000199420 Mphosph9A6H5Y1 991 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Znf326O88291 580 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Ccnb3Q810T2 1396 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Siglec1Q62230 1695 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Fmn2Q9JL04 1578 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Ccdc183A2AJB1 534 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 TimelessQ9R1X4 1197 aa7.23□□□□□ -1.25
Csde1-215ENSMUST00000199420 Rock1P70335 1354 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Plch2A2AP18 1501 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 PogkQ80TC5 607 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Usp47Q8BY87 1376 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Ehbp1l1Q99MS7 1716 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Lmod2Q3UHZ5 550 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 MaddQ80U28 1577 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Sptbn5F6UCX4 1208 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Trap1aP19473 224 aa7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Tpm3P21107 285 aaKnown RBP7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 Senp3Q9EP97 568 aaKnown RBP7.22□□□□□ -1.25
Csde1-215ENSMUST00000199420 AlkP97793 1621 aa7.21□□□□□ -1.25
Csde1-215ENSMUST00000199420 Unc13bQ9Z1N9 1602 aa7.21□□□□□ -1.25
Csde1-215ENSMUST00000199420 Pik3c2aQ61194 1686 aa7.21□□□□□ -1.25
Csde1-215ENSMUST00000199420 Hs1bp3Q3TC93 395 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 B4galnt3Q6L8S8 986 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 Paxip1Q6NZQ4 1056 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 DekQ7TNV0 380 aaKnown RBP7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ppp1r18Q8BQ30 594 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ak7Q9D2H2 614 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 Rprd2Q6NXI6 1469 aaKnown RBP7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 DnmbpQ6TXD4 1580 aa7.21□□□□□ -1.26
Csde1-215ENSMUST00000199420 Smc5Q8CG46 1101 aaKnown RBP7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Nlrp6Q91WS2 869 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Dhx57Q6P5D3 1388 aaKnown RBP7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Naip6Q9JIB6 1403 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Nhsl1Q8CAF4 1587 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Mroh3A0A1D5RM54 893 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Pkd2O35245 966 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Kcnn1Q9EQR3 537 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Erich6bQ9D4S6 220 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Nrxn3Q6P9K9 1571 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Plekhh2Q8C115 1491 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 PplQ9R269 1755 aa7.2□□□□□ -1.26
Csde1-215ENSMUST00000199420 Mcm4P49717 862 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 L3mbtl2P59178 703 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Cypt2Q6P924 180 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Dapk1Q80YE7 1442 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 NcapgE9PWG6 1004 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Pik3c2gO70167 1506 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Cspp1B2RX88 1205 aa7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Rbm10Q99KG3 930 aaKnown RBP7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Eif2s2Q99L45 331 aaKnown RBP7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 N4bp2F8VQG7 1678 aaKnown RBP7.19□□□□□ -1.26
Csde1-215ENSMUST00000199420 Gemin5Q8BX17 1502 aaKnown RBP7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 Slit2Q9R1B9 1521 aa7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 EzrP26040 586 aaKnown RBP7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 Znf518aB2RRF6 1478 aaKnown RBP7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 Dennd4bQ3U1Y4 1499 aa7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 Robo1O89026 1612 aa7.18□□□□□ -1.26
Csde1-215ENSMUST00000199420 Uggt1Q6P5E4 1551 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Abca8aQ8K442 1620 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Calcoco2A2A6M5 331 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Rad21Q61550 635 aaKnown RBP7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Caskin1Q6P9K8 1431 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 RdxP26043 583 aaKnown RBP7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ralbp1Q62172 648 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Usp54Q8BL06 1588 aaKnown RBP7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ppp2r3aB2RXC8 1150 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Rims2Q9EQZ7 1530 aa7.17□□□□□ -1.26
Csde1-215ENSMUST00000199420 Wnk3Q80XP9 1757 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 FanciQ8K368 1330 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 SlkO54988 1233 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Zfp444Q3TDV8 331 aaKnown RBP7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Mrvi1Q9WUX5 899 aaKnown RBP7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Rundc1Q0VDN7 615 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Kif27Q7M6Z4 1394 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Elp1Q7TT37 1333 aaKnown RBP7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Gm6268A2A3U9 297 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Trim58Q5NCC9 485 aa7.16□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ccdc94Q9D6J3 314 aa7.15□□□□□ -1.26
Csde1-215ENSMUST00000199420 Ncapd2Q8K2Z4 1392 aa7.15□□□□□ -1.26
Csde1-215ENSMUST00000199420 Cgnl1Q6AW69 1298 aa7.15□□□□□ -1.26
Csde1-215ENSMUST00000199420 Scaf11E9PZM7 1456 aaKnown RBP7.15□□□□□ -1.27
Csde1-215ENSMUST00000199420 Kdm2bQ6P1G2 1309 aa7.15□□□□□ -1.27
Csde1-215ENSMUST00000199420 Tmf1B9EKI3 1091 aa7.15□□□□□ -1.27
Csde1-215ENSMUST00000199420 Zfp777B9EKF4 885 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Hoxa7P02830 229 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Dbr1Q923B1 550 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Armcx1Q9CX83 456 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Abcc6Q9R1S7 1498 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Gtpbp4Q99ME9 634 aaKnown RBP7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 Gli2Q0VGT2 1544 aa7.14□□□□□ -1.27
Csde1-215ENSMUST00000199420 ImpactO55091 318 aa7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms