RNA–Protein interactions for RNA: ENSMUST00000199420.4

Csde1-215, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-215ENSMUST00000199420 Gm35339A0A140LHH9 1649 aa11.97□□□□□ -0.49
Csde1-215ENSMUST00000199420 ScribQ80U72 1612 aa10.95□□□□□ -0.66
Csde1-215ENSMUST00000199420 NischQ80TM9 1593 aa10.86□□□□□ -0.67
Csde1-215ENSMUST00000199420 Abcc8B2RUS7 1588 aa10.85□□□□□ -0.67
Csde1-215ENSMUST00000199420 Abcc9P70170 1546 aa10.76□□□□□ -0.69
Csde1-215ENSMUST00000199420 Rpgrip1Q9EPQ2 1331 aa10.24□□□□□ -0.77
Csde1-215ENSMUST00000199420 BicraF8VPZ9 1578 aa10.2□□□□□ -0.78
Csde1-215ENSMUST00000199420 Dcaf1Q80TR8 1506 aa10.15□□□□□ -0.78
Csde1-215ENSMUST00000199420 Kdm5dQ62240 1548 aa10.15□□□□□ -0.78
Csde1-215ENSMUST00000199420 NacadQ5SWP3 1504 aa10.02□□□□□ -0.81
Csde1-215ENSMUST00000199420 Sycp2Q9CUU3 1500 aa10□□□□□ -0.81
Csde1-215ENSMUST00000199420 Thoc2B1AZI6 1594 aaKnown RBP10□□□□□ -0.81
Csde1-215ENSMUST00000199420 Ccdc180J3QNE4 1664 aa9.84□□□□□ -0.83
Csde1-215ENSMUST00000199420 Dnajc5bQ9CQ94 199 aa9.82□□□□□ -0.84
Csde1-215ENSMUST00000199420 Rtl1Q7M732 1744 aa9.67□□□□□ -0.86
Csde1-215ENSMUST00000199420 Unc13aQ4KUS2 1712 aa9.64□□□□□ -0.87
Csde1-215ENSMUST00000199420 Fam135aQ6NS59 1506 aa9.55□□□□□ -0.88
Csde1-215ENSMUST00000199420 Crybg2B7ZCC2 1516 aa9.52□□□□□ -0.89
Csde1-215ENSMUST00000199420 Las1lA2BE28 776 aaKnown RBP9.48□□□□□ -0.89
Csde1-215ENSMUST00000199420 Cc2d2aQ8CFW7 1633 aa9.46□□□□□ -0.89
Csde1-215ENSMUST00000199420 Myt1Q8CFC2 1127 aa9.42□□□□□ -0.9
Csde1-215ENSMUST00000199420 Rb1cc1Q9ESK9 1588 aa9.42□□□□□ -0.9
Csde1-215ENSMUST00000199420 Acin1Q9JIX8 1338 aaKnown RBP9.35□□□□□ -0.91
Csde1-215ENSMUST00000199420 Baz1aO88379 1555 aa9.34□□□□□ -0.91
Csde1-215ENSMUST00000199420 Baz1bQ9Z277 1479 aa9.34□□□□□ -0.91
Csde1-215ENSMUST00000199420 Wdr62Q3U3T8 1523 aa9.32□□□□□ -0.92
Csde1-215ENSMUST00000199420 Cngb1E1AZ71 1325 aa9.32□□□□□ -0.92
Csde1-215ENSMUST00000199420 Smarca2Q6DIC0 1577 aa9.31□□□□□ -0.92
Csde1-215ENSMUST00000199420 Pds5bQ4VA53 1446 aaKnown RBP9.29□□□□□ -0.92
Csde1-215ENSMUST00000199420 Atad2bE9Q166 1460 aaKnown RBP9.29□□□□□ -0.92
Csde1-215ENSMUST00000199420 Smarca4Q3TKT4 1613 aaKnown RBP9.24□□□□□ -0.93
Csde1-215ENSMUST00000199420 Iqgap2Q3UQ44 1575 aa9.23□□□□□ -0.93
Csde1-215ENSMUST00000199420 Frmpd1A2AKB4 1549 aa9.21□□□□□ -0.94
Csde1-215ENSMUST00000199420 Rhox8Q6VSS7 320 aa9.19□□□□□ -0.94
Csde1-215ENSMUST00000199420 Cecr2E9Q2Z1 1453 aa9.11□□□□□ -0.95
Csde1-215ENSMUST00000199420 Lrriq1Q0P5X1 1673 aa9.07□□□□□ -0.96
Csde1-215ENSMUST00000199420 Pcgf6Q99NA9 353 aa9.03□□□□□ -0.96
Csde1-215ENSMUST00000199420 CenpbP27790 599 aa9.02□□□□□ -0.97
Csde1-215ENSMUST00000199420 Dnajc5P60904 198 aa8.96□□□□□ -0.97
Csde1-215ENSMUST00000199420 HrcG5E8J6 738 aa8.96□□□□□ -0.98
Csde1-215ENSMUST00000199420 Eif4g3Q80XI3 1579 aaKnown RBP8.94□□□□□ -0.98
Csde1-215ENSMUST00000199420 Setd1bQ8CFT2 1985 aa8.94□□□□□ -0.98
Csde1-215ENSMUST00000199420 Kif21aQ9QXL2 1672 aa8.93□□□□□ -0.98
Csde1-215ENSMUST00000199420 Gpatch8A2A6A1 1505 aa8.92□□□□□ -0.98
Csde1-215ENSMUST00000199420 Shroom2A2ALU4 1481 aa8.91□□□□□ -0.98
Csde1-215ENSMUST00000199420 Ercc6F8VPZ5 1481 aa8.9□□□□□ -0.98
Csde1-215ENSMUST00000199420 Cttnbp2B9EJA2 1648 aa8.9□□□□□ -0.98
Csde1-215ENSMUST00000199420 Mrc2Q64449 1479 aa8.9□□□□□ -0.99
Csde1-215ENSMUST00000199420 Chic1Q8CBW7 227 aa8.85□□□□□ -0.99
Csde1-215ENSMUST00000199420 Phldb1Q6PDH0 1371 aaKnown RBP8.85□□□□□ -0.99
Csde1-215ENSMUST00000199420 NefmP08553 848 aa8.85□□□□□ -0.99
Csde1-215ENSMUST00000199420 Col17a1Q07563 1470 aa8.82□□□□□ -1
Csde1-215ENSMUST00000199420 Synj1Q8CHC4 1574 aa8.82□□□□□ -1
Csde1-215ENSMUST00000199420 TnnQ80Z71 1560 aa8.82□□□□□ -1
Csde1-215ENSMUST00000199420 Pelp1Q9DBD5 1123 aaKnown RBP8.8□□□□□ -1
Csde1-215ENSMUST00000199420 Lamc3Q9R0B6 1581 aa8.78□□□□□ -1
Csde1-215ENSMUST00000199420 CftrP26361 1476 aa8.76□□□□□ -1.01
Csde1-215ENSMUST00000199420 DiexfQ8BTT6 772 aaKnown RBP8.73□□□□□ -1.01
Csde1-215ENSMUST00000199420 Rtl5Q5DTT4 599 aa8.7□□□□□ -1.02
Csde1-215ENSMUST00000199420 Zcchc11B2RX14 1644 aaKnown RBP8.7□□□□□ -1.02
Csde1-215ENSMUST00000199420 Aplp2Q06335 707 aa8.69□□□□□ -1.02
Csde1-215ENSMUST00000199420 Trim41Q5NCC3 630 aa8.68□□□□□ -1.02
Csde1-215ENSMUST00000199420 Anks4bQ8K3X6 423 aa8.68□□□□□ -1.02
Csde1-215ENSMUST00000199420 Rsf1E9PWW9 1441 aaKnown RBP8.67□□□□□ -1.02
Csde1-215ENSMUST00000199420 Top2bQ64511 1612 aa8.64□□□□□ -1.03
Csde1-215ENSMUST00000199420 Supt5hO55201 1082 aaKnown RBP8.63□□□□□ -1.03
Csde1-215ENSMUST00000199420 Zcchc6Q5BLK4 1491 aaKnown RBP8.62□□□□□ -1.03
Csde1-215ENSMUST00000199420 Neurod1Q60867 357 aa8.61□□□□□ -1.03
Csde1-215ENSMUST00000199420 Tnnt3Q9QZ47 272 aa8.6□□□□□ -1.03
Csde1-215ENSMUST00000199420 Urb2E9Q7L1 1524 aaKnown RBP8.59□□□□□ -1.03
Csde1-215ENSMUST00000199420 Amer1Q7TS75 1132 aa8.59□□□□□ -1.03
Csde1-215ENSMUST00000199420 Rusc2Q80U22 1514 aa8.58□□□□□ -1.04
Csde1-215ENSMUST00000199420 Pprc1Q6NZN1 1644 aa8.57□□□□□ -1.04
Csde1-215ENSMUST00000199420 Ehmt2Q9Z148 1263 aaKnown RBP8.57□□□□□ -1.04
Csde1-215ENSMUST00000199420 Cdk11bP24788 784 aaKnown RBP8.56□□□□□ -1.04
Csde1-215ENSMUST00000199420 Mapk8ip2Q9ERE9 830 aa8.55□□□□□ -1.04
Csde1-215ENSMUST00000199420 Pbrm1Q8BSQ9 1634 aaKnown RBP8.52□□□□□ -1.05
Csde1-215ENSMUST00000199420 Stra8P70278 393 aa8.5□□□□□ -1.05
Csde1-215ENSMUST00000199420 Zeb1Q64318 1117 aa8.5□□□□□ -1.05
Csde1-215ENSMUST00000199420 Chd1P40201 1711 aa8.49□□□□□ -1.05
Csde1-215ENSMUST00000199420 Camsap1A2AHC3 1581 aa8.49□□□□□ -1.05
Csde1-215ENSMUST00000199420 1700123L14RikQ3V2K7 440 aa8.45□□□□□ -1.06
Csde1-215ENSMUST00000199420 Cep164Q5DU05 1446 aa8.45□□□□□ -1.06
Csde1-215ENSMUST00000199420 Nop58Q6DFW4 536 aaKnown RBP8.44□□□□□ -1.06
Csde1-215ENSMUST00000199420 Crocc2F6XLV1 1638 aa8.44□□□□□ -1.06
Csde1-215ENSMUST00000199420 Wdr66E9Q743 1299 aa8.43□□□□□ -1.06
Csde1-215ENSMUST00000199420 Setbp1Q9Z180 1582 aa8.42□□□□□ -1.06
Csde1-215ENSMUST00000199420 Samd9lQ69Z37 1561 aa8.42□□□□□ -1.06
Csde1-215ENSMUST00000199420 ClspnQ80YR7 1315 aa8.41□□□□□ -1.06
Csde1-215ENSMUST00000199420 Arhgef5E9Q7D5 1581 aa8.41□□□□□ -1.06
Csde1-215ENSMUST00000199420 Nup160Q9Z0W3 1402 aaKnown RBP8.4□□□□□ -1.06
Csde1-215ENSMUST00000199420 Ccdc9Q8VC31 543 aaKnown RBP8.4□□□□□ -1.07
Csde1-215ENSMUST00000199420 Cux2P70298 1426 aa8.39□□□□□ -1.07
Csde1-215ENSMUST00000199420 Plb1Q3TTY0 1478 aa8.38□□□□□ -1.07
Csde1-215ENSMUST00000199420 Disp1Q3TDN0 1521 aa8.37□□□□□ -1.07
Csde1-215ENSMUST00000199420 Bcl11aQ9QYE3 773 aa8.36□□□□□ -1.07
Csde1-215ENSMUST00000199420 Dnmt1P13864 1620 aaKnown RBP8.36□□□□□ -1.07
Csde1-215ENSMUST00000199420 Magi3Q9EQJ9 1476 aa8.34□□□□□ -1.07
Csde1-215ENSMUST00000199420 BC005561E9Q5E2 1589 aa8.34□□□□□ -1.07
Csde1-215ENSMUST00000199420 Csrnp3P59055 597 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms