RNA–Protein interactions for RNA: ENSMUST00000199079.1

Rpf1-203, Transcript of Ribosome production factor 1, mousemouse

TSL 1 (best) BASIC

Gene Rpf1, Length 1,978 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-203ENSMUST00000199079 Speer4f1Q9D5Q6 258 aa22.15■■□□□ 1.14
Rpf1-203ENSMUST00000199079 Puf60Q3UEB3 564 aaKnown RBP22.14■■□□□ 1.14
Rpf1-203ENSMUST00000199079 Ccdc30Q8BVF4 654 aa22.14■■□□□ 1.14
Rpf1-203ENSMUST00000199079 Cfap65Q3V0B4 1847 aa22.14■■□□□ 1.13
Rpf1-203ENSMUST00000199079 AdgbG3UZ78 1657 aa22.14■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Ift172Q6VH22 1749 aa22.14■■□□□ 1.13
Rpf1-203ENSMUST00000199079 InsrP15208 1372 aa22.13■■□□□ 1.13
Rpf1-203ENSMUST00000199079 PalldQ9ET54 1408 aa22.13■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Golga2Q921M4 999 aa22.12■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Bcl11aQ9QYE3 773 aa22.12■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Hfm1D3Z4R1 1434 aa22.12■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Map4k4P97820 1233 aaKnown RBP22.11■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Kiaa1107Q80TK0 1369 aa22.11■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Uspl1Q3ULM6 1089 aa22.1■■□□□ 1.13
Rpf1-203ENSMUST00000199079 EspnQ9ET47 871 aa22.1■■□□□ 1.13
Rpf1-203ENSMUST00000199079 AampJ3QN89 436 aa22.09■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Mapk8ip3Q9ESN9 1337 aa22.08■■□□□ 1.13
Rpf1-203ENSMUST00000199079 Slc52a2Q9D8F3 450 aa22.08■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Lrrc7Q80TE7 1490 aa22.06■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Mroh1E0CZ22 1640 aa22.06■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Adamts7Q68SA9 1657 aa22.06■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Kiaa0556Q8C753 1610 aa22.05■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Ncbp3Q8BZR9 615 aaKnown RBP22.05■■□□□ 1.12
Rpf1-203ENSMUST00000199079 IbtkQ6ZPR6 1352 aaKnown RBP22.04■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Ccdc9Q8VC31 543 aaKnown RBP22.04■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Iqsec2Q5DU25 1478 aa22.04■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Smc5Q8CG46 1101 aaKnown RBP22.03■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Scaf11E9PZM7 1456 aaKnown RBP22.03■■□□□ 1.12
Rpf1-203ENSMUST00000199079 DiexfQ8BTT6 772 aaKnown RBP22.03■■□□□ 1.12
Rpf1-203ENSMUST00000199079 Adgrl1Q80TR1 1466 aa22.03■■□□□ 1.12
Rpf1-203ENSMUST00000199079 RereQ80TZ9 1558 aa22.02■■□□□ 1.12
Rpf1-203ENSMUST00000199079 CenpjQ569L8 1344 aa22.01■■□□□ 1.11
Rpf1-203ENSMUST00000199079 IqubQ8CDK3 788 aa22.01■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Ptch1Q61115 1434 aa22■■□□□ 1.11
Rpf1-203ENSMUST00000199079 AU022751B1B0V2 589 aa22■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Dip2cE9PWR4 1557 aa22■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Stag3O70576 1240 aa21.99■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Chmp5Q9D7S9 219 aa21.99■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Knl1Q66JQ7 1612 aa21.99■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Med14A2ABV5 1459 aaKnown RBP21.99■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Neurod2Q62414 383 aa21.98■■□□□ 1.11
Rpf1-203ENSMUST00000199079 GsdmaQ9EST1 446 aa21.98■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Cald1E9QA15 768 aaKnown RBP21.96■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Znf521Q6KAS7 1311 aa21.96■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Nrxn1Q9CS84 1514 aa21.96■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Iqcf3Q9D498 203 aa21.96■■□□□ 1.11
Rpf1-203ENSMUST00000199079 Nkx1-2P42580 305 aa21.95■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Hecw2Q6I6G8 1578 aa21.94■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Fam135bQ9DAI6 1403 aa21.94■■□□□ 1.1
Rpf1-203ENSMUST00000199079 B4galnt3Q6L8S8 986 aa21.94■■□□□ 1.1
Rpf1-203ENSMUST00000199079 NudcO35685 332 aaKnown RBP21.93■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Trim58Q5NCC9 485 aa21.93■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Tmc1Q8R4P5 757 aa21.92■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Hsp90aa1P07901 733 aaKnown RBP21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 ChgaP26339 463 aaKnown RBP21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Cnga1P29974 684 aa21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Arhgap23Q69ZH9 1483 aa21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Ppm1gQ61074 542 aa21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Apbb1Q9QXJ1 710 aa21.9■■□□□ 1.1
Rpf1-203ENSMUST00000199079 Plppr3Q7TPB0 716 aa21.88■■□□□ 1.09
Rpf1-203ENSMUST00000199079 P2rx7Q9Z1M0 595 aa21.87■■□□□ 1.09
Rpf1-203ENSMUST00000199079 CltcQ68FD5 1675 aaKnown RBP21.86■■□□□ 1.09
Rpf1-203ENSMUST00000199079 CanxP35564 591 aaKnown RBP21.86■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Cul9Q80TT8 1865 aa21.86■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Dnai1Q8C0M8 701 aa21.84■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Ciz1Q8VEH2 845 aa21.84■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Znf541Q0GGX2 1363 aa21.84■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Dbr1Q923B1 550 aa21.83■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Ahdc1Q6PAL7 1594 aaKnown RBP21.83■■□□□ 1.09
Rpf1-203ENSMUST00000199079 Tspyl2Q7TQI8 677 aa21.83■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Mre11Q61216 706 aa21.82■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Prrc2bQ7TPM1 1486 aaKnown RBP21.81■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Gas2l2Q5SSG4 860 aa21.81■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Alpk3Q924C5 1678 aa21.8■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Ipo8Q7TMY7 1010 aa21.8■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Pank1Q8K4K6 548 aa21.8■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Dnajc5gQ8C632 165 aa21.79■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Ccar1Q8CH18 1146 aaKnown RBP21.79■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Qser1A2BIE1 1698 aa21.78■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Tsen2Q6P7W5 460 aa21.78■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Rsph4aQ8BYM7 716 aa21.78■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Exosc9Q9JHI7 438 aaKnown RBP21.78■■□□□ 1.08
Rpf1-203ENSMUST00000199079 Prdm10Q3UTQ7 1184 aa21.77■■□□□ 1.08
Rpf1-203ENSMUST00000199079 U2af1Q9D883 239 aaKnown RBP21.76■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Plekhg1F6S200 1446 aa21.76■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Atxn3Q9CVD2 355 aa21.76■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Arhgef28P97433 1693 aa21.75■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Duxf3A0A0N4SV92 674 aa21.75■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Uhrf1bp1B2KF50 1429 aa21.74■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Yeats2Q3TUF7 1407 aa21.74■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Synj2Q9D2G5 1434 aa21.74■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Usp32F8VPZ3 1604 aa21.74■■□□□ 1.07
Rpf1-203ENSMUST00000199079 PtprmP28828 1452 aa21.74■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Ccdc183A2AJB1 534 aa21.73■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Sart3Q9JLI8 962 aaKnown RBP21.72■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Ksr2Q3UVC0 959 aa21.72■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Atl3Q91YH5 541 aa21.72■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Ak7Q9D2H2 614 aa21.72■■□□□ 1.07
Rpf1-203ENSMUST00000199079 PaskQ8CEE6 1383 aa21.71■■□□□ 1.07
Rpf1-203ENSMUST00000199079 Trim30dE9PWL0 497 aa21.7■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms