RNA–Protein interactions for RNA: ENSMUST00000198180.4

Csde1-211, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-211ENSMUST00000198180 AatkQ80YE4 1365 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 GorabQ8BRM2 368 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 PalmQ9Z0P4 383 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 Tarbp1E9Q368 1579 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 Cul7Q8VE73 1689 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 PtprtQ99M80 1454 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 Cavin4A2AMM0 362 aa9.75□□□□□ -0.85
Csde1-211ENSMUST00000198180 Chmp4bQ9D8B3 224 aaKnown RBP9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Zfp777B9EKF4 885 aa9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 KarsQ99MN1 595 aaKnown RBP9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Rtn4Q99P72 1162 aaKnown RBP9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Mast1Q9R1L5 1570 aa9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 KnstrnQ9D9Z1 312 aaKnown RBP9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Cabp2Q9JLK4 216 aa9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Fhod3Q76LL6 1578 aa9.74□□□□□ -0.85
Csde1-211ENSMUST00000198180 Ak7Q9D2H2 614 aa9.73□□□□□ -0.85
Csde1-211ENSMUST00000198180 Gli2Q0VGT2 1544 aa9.73□□□□□ -0.85
Csde1-211ENSMUST00000198180 Ccdc146E9Q9F7 977 aa9.73□□□□□ -0.85
Csde1-211ENSMUST00000198180 Eif2s2Q99L45 331 aaKnown RBP9.73□□□□□ -0.85
Csde1-211ENSMUST00000198180 Pprc1Q6NZN1 1644 aa9.72□□□□□ -0.85
Csde1-211ENSMUST00000198180 Slc12a5Q91V14 1138 aa9.72□□□□□ -0.85
Csde1-211ENSMUST00000198180 Kank1E9Q238 1360 aa9.71□□□□□ -0.85
Csde1-211ENSMUST00000198180 Plcb2A3KGF7 1181 aa9.71□□□□□ -0.85
Csde1-211ENSMUST00000198180 Usp54Q8BL06 1588 aaKnown RBP9.71□□□□□ -0.85
Csde1-211ENSMUST00000198180 Dot1lQ6XZL8 1540 aa9.71□□□□□ -0.86
Csde1-211ENSMUST00000198180 Znf518aB2RRF6 1478 aaKnown RBP9.71□□□□□ -0.86
Csde1-211ENSMUST00000198180 HnrnpuQ8VEK3 800 aaKnown RBP9.71□□□□□ -0.86
Csde1-211ENSMUST00000198180 Gas2l2Q5SSG4 860 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Sart3Q9JLI8 962 aaKnown RBP9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Zmym4A2A791 1549 aaKnown RBP9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Gnai1B2RSH2 354 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Triml2E9PW10 424 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Hsp90b1P08113 802 aaKnown RBP9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Uspl1Q3ULM6 1089 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 DiexfQ8BTT6 772 aaKnown RBP9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Gnai3Q9DC51 354 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Lamc1P02468 1607 aaKnown RBP9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Mcm10Q0VBD2 885 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Erbb3Q61526 1339 aa9.7□□□□□ -0.86
Csde1-211ENSMUST00000198180 Fyb1O35601 819 aa9.69□□□□□ -0.86
Csde1-211ENSMUST00000198180 Ric3Q8BPM6 367 aa9.69□□□□□ -0.86
Csde1-211ENSMUST00000198180 NinlQ6ZQ12 1394 aa9.69□□□□□ -0.86
Csde1-211ENSMUST00000198180 AU022751B1B0V2 589 aa9.69□□□□□ -0.86
Csde1-211ENSMUST00000198180 Kif1bQ60575 1816 aaKnown RBP9.69□□□□□ -0.86
Csde1-211ENSMUST00000198180 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Setbp1Q9Z180 1582 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Ppip5k1A2ARP1 1436 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Map4k4P97820 1233 aaKnown RBP9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Q3UJC8 639 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Ggnbp2Q5SV77 696 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Prrc2bQ7TPM1 1486 aaKnown RBP9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 IbtkQ6ZPR6 1352 aaKnown RBP9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Liat1Q810M6 228 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Htatsf1Q8BGC0 757 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Ciz1Q8VEH2 845 aa9.68□□□□□ -0.86
Csde1-211ENSMUST00000198180 Pip4k2bQ80XI4 416 aa9.67□□□□□ -0.86
Csde1-211ENSMUST00000198180 Mbd5B1AYB6 1498 aa9.67□□□□□ -0.86
Csde1-211ENSMUST00000198180 Sbno1Q689Z5 1390 aa9.67□□□□□ -0.86
Csde1-211ENSMUST00000198180 Ccdc183A2AJB1 534 aa9.66□□□□□ -0.86
Csde1-211ENSMUST00000198180 TatQ8QZR1 454 aa9.66□□□□□ -0.86
Csde1-211ENSMUST00000198180 Gm16486A0A1D5RMD1 1434 aa9.66□□□□□ -0.86
Csde1-211ENSMUST00000198180 InsrP15208 1372 aa9.66□□□□□ -0.86
Csde1-211ENSMUST00000198180 Bcl2l13P59017 434 aa9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Cdc37l1Q9CZP7 335 aa9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Evi5lH3BKQ3 813 aa9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Maco1Q7TQE6 664 aaKnown RBP9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Dennd6aQ8BH65 605 aa9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Cfap65Q3V0B4 1847 aa9.65□□□□□ -0.86
Csde1-211ENSMUST00000198180 Yeats2Q3TUF7 1407 aa9.65□□□□□ -0.87
Csde1-211ENSMUST00000198180 Lrrc7Q80TE7 1490 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Rnf17Q99MV7 1640 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Trpm2Q91YD4 1506 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Tulp4Q9JIL5 1547 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Gm10563F6WIE4 79 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Eif4g2Q62448 906 aaKnown RBP9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 PalldQ9ET54 1408 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Atf7ipQ7TT18 1306 aa9.64□□□□□ -0.87
Csde1-211ENSMUST00000198180 Nphp4P59240 1425 aa9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 Slc4a10Q5DTL9 1118 aa9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 TmpoQ61033 693 aaKnown RBP9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 Aplp1Q03157 653 aa9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 Kdm5cP41230 1554 aa9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 Depdc5P61460 1591 aa9.63□□□□□ -0.87
Csde1-211ENSMUST00000198180 CatipB9EKE5 520 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Ccdc171E9Q1U1 1324 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Talpid3E9PV87 1520 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 TnikP83510 1323 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Fchsd2Q3USJ8 740 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Sv2bQ8BG39 683 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Klhdc4Q921I2 584 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Nos1Q9Z0J4 1429 aa9.62□□□□□ -0.87
Csde1-211ENSMUST00000198180 Gm32742A0A1B0GT42 1604 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Ppp1r15aP17564 657 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Idi2Q8BFZ6 227 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Atl3Q91YH5 541 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Abcc3B2RX12 1523 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Adgrl3Q80TS3 1537 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Rfx1P48377 963 aa9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Smc5Q8CG46 1101 aaKnown RBP9.61□□□□□ -0.87
Csde1-211ENSMUST00000198180 Cep170Q6A065 1588 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms