RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Hnrnpul1Q8VDM6 859 aaKnown RBP15.26■□□□□ 0.03
Fn1-211ENSMUST00000187938 ZgpatQ8VDM1 511 aa15.25■□□□□ 0.03
Fn1-211ENSMUST00000187938 Erc2Q6PH08 957 aa15.25■□□□□ 0.03
Fn1-211ENSMUST00000187938 Nsrp1Q5NCR9 542 aa15.25■□□□□ 0.03
Fn1-211ENSMUST00000187938 Mns1Q61884 491 aa15.25■□□□□ 0.03
Fn1-211ENSMUST00000187938 Pds5bQ4VA53 1446 aaKnown RBP15.25■□□□□ 0.03
Fn1-211ENSMUST00000187938 WrnO09053 1401 aa15.24■□□□□ 0.03
Fn1-211ENSMUST00000187938 Ttll12Q3UDE2 639 aa15.24■□□□□ 0.03
Fn1-211ENSMUST00000187938 Gpatch3Q8BIY1 525 aa15.24■□□□□ 0.03
Fn1-211ENSMUST00000187938 NgdnQ9DB96 315 aaKnown RBP15.24■□□□□ 0.03
Fn1-211ENSMUST00000187938 Usp40Q8BWR4 1235 aa15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 Dcaf1Q80TR8 1506 aa15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 Hspa5P20029 655 aaKnown RBP15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 ApobrQ8VBT6 942 aa15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 Odf2lQ9D478 642 aa15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 Galntl5Q9D4M9 431 aa15.23■□□□□ 0.03
Fn1-211ENSMUST00000187938 Tmod2Q9JKK7 351 aa15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 Ssr1Q9CY50 286 aaKnown RBP15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 Rsph6aQ8CDR2 708 aa15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 TprnA2AI08 749 aaKnown RBP15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 Ipo8Q7TMY7 1010 aa15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 KinQ8K339 391 aa15.22■□□□□ 0.03
Fn1-211ENSMUST00000187938 Plekhg5Q66T02 1073 aa15.21■□□□□ 0.03
Fn1-211ENSMUST00000187938 G3bp1P97855 465 aaKnown RBP15.21■□□□□ 0.02
Fn1-211ENSMUST00000187938 Znf428Q8C1M2 176 aa15.21■□□□□ 0.02
Fn1-211ENSMUST00000187938 Znhit6Q3UFB2 460 aaKnown RBP15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Rbm27Q5SFM8 1060 aaKnown RBP15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Gsto1O09131 240 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 SnrkQ8VDU5 748 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Baz1bQ9Z277 1479 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Stard3nlQ9DCI3 235 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Triml2E9PW10 424 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Plekhh2Q8C115 1491 aa15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Mad1l1Q9WTX8 717 aaKnown RBP15.2■□□□□ 0.02
Fn1-211ENSMUST00000187938 Epb41l3Q9WV92 929 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Znf219Q6IQX8 726 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Cfap69Q8BH53 942 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Igf2bp2Q5SF07 592 aaKnown RBP15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Dnai1Q8C0M8 701 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Strn4P58404 760 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 SlmapQ3URD3 845 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Abcc8B2RUS7 1588 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Cbx1P83917 185 aaKnown RBP15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Chaf1aQ9QWF0 911 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Cfap99A0A140LIX9 648 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 EappQ5BU09 281 aa15.19■□□□□ 0.02
Fn1-211ENSMUST00000187938 Usp16Q99LG0 825 aa15.18■□□□□ 0.02
Fn1-211ENSMUST00000187938 Samd1D3YXK1 519 aa15.18■□□□□ 0.02
Fn1-211ENSMUST00000187938 Matr3Q8K310 846 aaKnown RBP15.18■□□□□ 0.02
Fn1-211ENSMUST00000187938 Kdm4aQ8BW72 1064 aa15.18■□□□□ 0.02
Fn1-211ENSMUST00000187938 OptnQ8K3K8 584 aa15.17■□□□□ 0.02
Fn1-211ENSMUST00000187938 Mphosph9A6H5Y1 991 aa15.17■□□□□ 0.02
Fn1-211ENSMUST00000187938 Eif3aP23116 1344 aaKnown RBP15.17■□□□□ 0.02
Fn1-211ENSMUST00000187938 Ttc19Q8CC21 365 aa15.17■□□□□ 0.02
Fn1-211ENSMUST00000187938 Smg6P61406 1418 aaKnown RBP15.17■□□□□ 0.02
Fn1-211ENSMUST00000187938 Washc2Q6PGL7 1334 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Hmox1P14901 289 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Anp32eP97822 260 aaKnown RBP15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 PnisrA2AJT4 805 aaKnown RBP15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Dctn1O08788 1281 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Gimap6Q8K349 305 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Klc3Q91W40 508 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Kif3aP28741 701 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 GsdmaQ9EST1 446 aa15.16■□□□□ 0.02
Fn1-211ENSMUST00000187938 Tpd52l2Q9CYZ2 220 aaKnown RBP15.15■□□□□ 0.02
Fn1-211ENSMUST00000187938 Sv2bQ8BG39 683 aa15.15■□□□□ 0.02
Fn1-211ENSMUST00000187938 Mrvi1Q9WUX5 899 aaKnown RBP15.15■□□□□ 0.02
Fn1-211ENSMUST00000187938 Nup133Q8R0G9 1155 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Homer1Q9Z2Y3 366 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Golga3P55937 1487 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 UacaQ8CGB3 1411 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Chmp4cQ9D7F7 232 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Dhx8A2A4P0 1244 aaKnown RBP15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Phactr2B1AVP0 632 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Smc3Q9CW03 1217 aaKnown RBP15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Gimap5Q8BWF2 308 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Erlin2Q8BFZ9 340 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Acsbg1Q99PU5 721 aa15.14■□□□□ 0.01
Fn1-211ENSMUST00000187938 Ric3Q8BPM6 367 aa15.13■□□□□ 0.01
Fn1-211ENSMUST00000187938 Olr1Q9EQ09 363 aa15.13■□□□□ 0.01
Fn1-211ENSMUST00000187938 Kif3cO35066 796 aa15.13■□□□□ 0.01
Fn1-211ENSMUST00000187938 Fyco1Q8VDC1 1437 aa15.13■□□□□ 0.01
Fn1-211ENSMUST00000187938 Elp1Q7TT37 1333 aaKnown RBP15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 TrhQ62361 256 aa15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 ErbinQ80TH2 1402 aa15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 Q9D9H8 365 aa15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 Stk3Q9JI10 497 aa15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 Rbm25B2RY56 838 aaKnown RBP15.12■□□□□ 0.01
Fn1-211ENSMUST00000187938 Fkbp4P30416 458 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 SlkO54988 1233 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Nop9Q8BMC4 636 aaKnown RBP15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 4930572O03RikQ8C5Y0 211 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Exoc6Q8R313 802 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Myo1bP46735 1107 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 ChgaP26339 463 aaKnown RBP15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Samm50Q8BGH2 469 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 L1td1Q587J6 782 aaKnown RBP15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 TkfcQ8VC30 578 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Slc13a4Q8BZ82 625 aa15.11■□□□□ 0.01
Fn1-211ENSMUST00000187938 Nlrp3Q8R4B8 1033 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms