RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Kcnh8P59111 1102 aa12.93□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Hecw2Q6I6G8 1578 aa12.93□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Polr3glQ8R0C0 218 aa12.93□□□□□ -0.34
Rnf41-202ENSMUST00000171342 NgefQ8CHT1 710 aa12.92□□□□□ -0.34
Rnf41-202ENSMUST00000171342 U2af1Q9D883 239 aaKnown RBP12.92□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Nolc1E9Q5C9 702 aaKnown RBP12.92□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Kif16bB1AVY7 1312 aa12.92□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Kiaa0556Q8C753 1610 aa12.91□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Akap12Q9WTQ5 1684 aa12.91□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Ehbp1l1Q99MS7 1716 aa12.91□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Tex14Q7M6U3 1450 aa12.9□□□□□ -0.34
Rnf41-202ENSMUST00000171342 InsrP15208 1372 aa12.9□□□□□ -0.34
Rnf41-202ENSMUST00000171342 GsdmaQ9EST1 446 aa12.9□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Trim26Q99PN3 545 aa12.9□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Ahdc1Q6PAL7 1594 aaKnown RBP12.9□□□□□ -0.34
Rnf41-202ENSMUST00000171342 Amer1Q7TS75 1132 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Mroh1E0CZ22 1640 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Zmym4A2A791 1549 aaKnown RBP12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Uggt1Q6P5E4 1551 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Ino80Q6ZPV2 1559 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Cald1E9QA15 768 aaKnown RBP12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Birc3O08863 600 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Tsen2Q6P7W5 460 aa12.89□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Naip7Q9JIB3 1402 aa12.88□□□□□ -0.35
Rnf41-202ENSMUST00000171342 HnrnpmQ9D0E1 729 aaKnown RBP12.88□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Fam71e1A1L3C1 212 aa12.88□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Erbb3Q61526 1339 aa12.87□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Ercc6l2Q9JIM3 1537 aa12.87□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Apaf1O88879 1249 aa12.87□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Rangap1P46061 589 aaKnown RBP12.87□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Cdk5rap2Q8K389 1822 aa12.86□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Ccdc30Q8BVF4 654 aa12.86□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Itsn2Q9Z0R6 1659 aa12.86□□□□□ -0.35
Rnf41-202ENSMUST00000171342 PtprmP28828 1452 aa12.86□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Bcl11aQ9QYE3 773 aa12.86□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Cul9Q80TT8 1865 aa12.85□□□□□ -0.35
Rnf41-202ENSMUST00000171342 CltcQ68FD5 1675 aaKnown RBP12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Sox12Q04890 314 aa12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Adamts7Q68SA9 1657 aa12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 MlecQ6ZQI3 291 aaKnown RBP12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Rwdd1Q9CQK7 243 aa12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Atf7ipQ7TT18 1306 aa12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 Tubgcp6G5E8P0 1769 aa12.84□□□□□ -0.35
Rnf41-202ENSMUST00000171342 FanciQ8K368 1330 aa12.83□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Trpm1Q2TV84 1622 aa12.83□□□□□ -0.36
Rnf41-202ENSMUST00000171342 NinlQ6ZQ12 1394 aa12.83□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Kdm5aQ3UXZ9 1690 aa12.83□□□□□ -0.36
Rnf41-202ENSMUST00000171342 P2rx7Q9Z1M0 595 aa12.82□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Kank1E9Q238 1360 aa12.82□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Cep170bQ80U49 1574 aa12.82□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Gprasp1Q5U4C1 1347 aa12.82□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Plin1Q8CGN5 517 aa12.81□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Plxnc1Q9QZC2 1574 aa12.81□□□□□ -0.36
Rnf41-202ENSMUST00000171342 ArxO35085 564 aa12.81□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Atxn3Q9CVD2 355 aa12.81□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Qser1A2BIE1 1698 aa12.81□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Kiaa1107Q80TK0 1369 aa12.8□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Mapk8ip3Q9ESN9 1337 aa12.8□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Supt16hQ920B9 1047 aa12.8□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Arhgap23Q69ZH9 1483 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 IghaA0A0A6YXW6 389 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 DnmbpQ6TXD4 1580 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 IbtkQ6ZPR6 1352 aaKnown RBP12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Senp3Q9EP97 568 aaKnown RBP12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Pcdh10E9PXQ7 1057 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Uspl1Q3ULM6 1089 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Ralbp1Q62172 648 aa12.79□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Scaf11E9PZM7 1456 aaKnown RBP12.78□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Ksr2Q3UVC0 959 aa12.78□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Gas2l2Q5SSG4 860 aa12.78□□□□□ -0.36
Rnf41-202ENSMUST00000171342 Map3k19E9Q3S4 1311 aa12.77□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Usp19Q3UJD6 1360 aa12.76□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Plekhh1Q80TI1 1356 aa12.75□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Map4k4P97820 1233 aaKnown RBP12.75□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Q3UJC8 639 aa12.75□□□□□ -0.37
Rnf41-202ENSMUST00000171342 MaddQ80U28 1577 aa12.75□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Slc12a5Q91V14 1138 aa12.74□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Dusp27Q148W8 1138 aa12.74□□□□□ -0.37
Rnf41-202ENSMUST00000171342 B4galnt3Q6L8S8 986 aa12.73□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Dbr1Q923B1 550 aa12.73□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Kif13aQ9EQW7 1749 aa12.72□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Idi2Q8BFZ6 227 aa12.72□□□□□ -0.37
Rnf41-202ENSMUST00000171342 PalmQ9Z0P4 383 aa12.72□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Myom1Q62234 1667 aaKnown RBP12.71□□□□□ -0.37
Rnf41-202ENSMUST00000171342 Prdm2A2A7B5 1709 aaKnown RBP12.71□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Plekhg1F6S200 1446 aa12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 CatipB9EKE5 520 aa12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Pank1Q8K4K6 548 aa12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 GphnQ8BUV3 769 aaKnown RBP12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Prkrip1Q9CWV6 186 aaKnown RBP12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Sipa1l1Q8C0T5 1782 aa12.7□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Gm6268A2A3U9 297 aa12.69□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Arhgef28P97433 1693 aa12.69□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Itsn1Q9Z0R4 1714 aa12.68□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Gm10563F6WIE4 79 aa12.68□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Ap3b2Q9JME5 1082 aa12.68□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Mbd3Q9Z2D8 285 aaKnown RBP12.68□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Eif2ak4Q9QZ05 1648 aa12.67□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Med14A2ABV5 1459 aaKnown RBP12.67□□□□□ -0.38
Rnf41-202ENSMUST00000171342 Mcm10Q0VBD2 885 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms