RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Rnf214Q8BFU3 668 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Necab1Q8BG18 352 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ints3Q7TPD0 1041 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Psma5Q9Z2U1 241 aaKnown RBP15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Me1P06801 572 aa15.44■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ubap1lG3UW59 384 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ncoa2Q61026 1462 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ccdc171E9Q1U1 1324 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 TatQ8QZR1 454 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 UvssaQ9D479 717 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Gcom1E9PZ54 550 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 MyzapQ3UIJ9 466 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 March6Q6ZQ89 909 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Zkscan2G3X952 960 aa15.43■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ppp2r3aB2RXC8 1150 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Q7TT23 1179 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Prdm16A2A935 1275 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 1700010I14RikQ7TPG0 532 aa15.42■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Pabpn1Q8CCS6 302 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Bcl2l13P59017 434 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Gnl3lQ6PGG6 577 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 A0A0U1RNP2 1173 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 BcanQ61361 883 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Rufy1Q8BIJ7 712 aa15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Mphosph10Q810V0 681 aaKnown RBP15.41■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Cavin4A2AMM0 362 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Eva1cP58659 440 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Ipo4Q8VI75 1082 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Q9D9H8 365 aa15.4■□□□□ 0.06
Gm28043-201ENSMUST00000130871 Rbm28Q8CGC6 750 aaKnown RBP15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Ppp2r1aQ76MZ3 589 aa15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Stk3Q9JI10 497 aa15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Tnpo1Q8BFY9 898 aaKnown RBP15.39■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Slc4a2P13808 1237 aaKnown RBP15.38■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zfp444Q3TDV8 331 aaKnown RBP15.38■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Anp32eP97822 260 aaKnown RBP15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zfp644E9QA22 1323 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 PdcQ9QW08 244 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Smarca2Q6DIC0 1577 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Gm10471E9Q1C7 252 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 HypkQ9CR41 129 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Pnmal2G3X9N3 661 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Gtf2f1Q3THK3 508 aaKnown RBP15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Lrrcc1Q69ZB0 1026 aa15.37■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Kif3cO35066 796 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Smc2Q8CG48 1191 aaKnown RBP15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Vps8Q0P5W1 1427 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 AnlnQ8K298 1121 aaKnown RBP15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Apaf1O88879 1249 aa15.36■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Rab3gap2Q8BMG7 1366 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Stk11ipQ3TAA7 1072 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Pdcl3Q8BVF2 240 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Cux1P53564 1515 aa15.35■□□□□ 0.05
Gm28043-201ENSMUST00000130871 HmmrQ00547 794 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Zkscan1Q8BGS3 561 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Hap1O35668 628 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Sirt1Q923E4 737 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 IbspQ61711 324 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 OptnQ8K3K8 584 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Q9D9S1 216 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Nap1l1P28656 391 aaKnown RBP15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Odf2lQ9D478 642 aa15.34■□□□□ 0.05
Gm28043-201ENSMUST00000130871 Mns1Q61884 491 aa15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 PsapQ61207 557 aaKnown RBP15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Gnai2P08752 355 aaKnown RBP15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Zpr1Q62384 459 aa15.33■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Agtpbp1Q641K1 1218 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Gcc1Q9D4H2 778 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Nphp1Q9QY53 687 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Abl1P00520 1123 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Atf3Q60765 181 aa15.32■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ift140E9PY46 1464 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Shroom4Q1W617 1475 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Chrna2Q91X60 512 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Fmnl2A2APV2 1086 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Zranb3Q6NZP1 1069 aa15.31■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Smarca4Q3TKT4 1613 aaKnown RBP15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 TefQ9JLC6 301 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cd109Q8R422 1442 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tmco3Q8BH01 678 aa15.3■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Babam1Q3UI43 333 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Sycp1Q62209 993 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ncbp3Q8BZR9 615 aaKnown RBP15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Stk38Q91VJ4 465 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Efcab5A0JP43 1406 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cdkn1cP49919 348 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Cnnm1Q0GA42 951 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Dusp9Q7TNL7 452 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Pknox2Q8BG99 474 aa15.29■□□□□ 0.04
Gm28043-201ENSMUST00000130871 MpripP97434 1024 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Prm3Q62100 101 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Fkbp4P30416 458 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Smg7Q5RJH6 1138 aaKnown RBP15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tubb6Q922F4 447 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Stard3nlQ9DCI3 235 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Ppp4r3bQ922R5 820 aa15.28■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Tmc1Q8R4P5 757 aa15.27■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Kcnh8P59111 1102 aa15.27■□□□□ 0.04
Gm28043-201ENSMUST00000130871 Nol8Q3UHX0 1147 aaKnown RBP15.27■□□□□ 0.03
Gm28043-201ENSMUST00000130871 Dusp27Q148W8 1138 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms