RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 PzpQ61838 1495 aa13.45□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Chd4Q6PDQ2 1915 aaKnown RBP13.45□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Spef2Q8C9J3 1734 aa13.45□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Tet3Q8BG87 1668 aa13.44□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Hnrnpul2Q00PI9 745 aaKnown RBP13.44□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Stk24Q99KH8 431 aa13.44□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Mroh3A0A1D5RM54 893 aa13.43□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Abcc10Q8R4P9 1501 aa13.43□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Smg6P61406 1418 aaKnown RBP13.43□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Tex14Q7M6U3 1450 aa13.42□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Ube2uB1AUC4 352 aa13.42□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Siglec1Q62230 1695 aa13.41□□□□□ -0.26
Prpf39-201ENSMUST00000120580 PrxO55103 1391 aa13.41□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Puf60Q3UEB3 564 aaKnown RBP13.41□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Card11Q8CIS0 1159 aa13.41□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Col16a1Q8BLX7 1580 aa13.4□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Iqsec2Q5DU25 1478 aa13.4□□□□□ -0.26
Prpf39-201ENSMUST00000120580 Las1lA2BE28 776 aaKnown RBP13.4□□□□□ -0.26
Prpf39-201ENSMUST00000120580 PtpruB1AUH1 1446 aa13.38□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Cwc22Q8C5N3 908 aaKnown RBP13.37□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Marf1Q8BJ34 1730 aaKnown RBP13.36□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Hdac5Q9Z2V6 1113 aa13.36□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Fan1Q69ZT1 1020 aa13.35□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Usp40Q8BWR4 1235 aa13.34□□□□□ -0.27
Prpf39-201ENSMUST00000120580 Myo5bP21271 1818 aa13.33□□□□□ -0.28
Prpf39-201ENSMUST00000120580 FocadA2AKG8 1798 aa13.32□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Amigo3Q8C2S7 508 aa13.31□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Znf710Q3U288 666 aa13.31□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Srcin1Q9QWI6 1250 aa13.3□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Stard8Q8K031 1019 aa13.3□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Erich6D3Z6S9 713 aa13.29□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Ptpn23Q6PB44 1692 aa13.28□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Tns3Q5SSZ5 1440 aa13.28□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Q9D9H8 365 aa13.28□□□□□ -0.28
Prpf39-201ENSMUST00000120580 Nfat5Q9WV30 1534 aa13.27□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Shq1Q7TMX5 569 aa13.26□□□□□ -0.29
Prpf39-201ENSMUST00000120580 P2rx7Q9Z1M0 595 aa13.26□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Zranb1Q7M760 708 aa13.25□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Kdm2aP59997 1161 aa13.24□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Fam135bQ9DAI6 1403 aa13.24□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Sirt1Q923E4 737 aa13.24□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Map3k19E9Q3S4 1311 aa13.22□□□□□ -0.29
Prpf39-201ENSMUST00000120580 PnisrA2AJT4 805 aaKnown RBP13.22□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Gm20521D3Z5F7 333 aa13.22□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Gm13695A2AK44 830 aa13.21□□□□□ -0.29
Prpf39-201ENSMUST00000120580 GphnQ8BUV3 769 aaKnown RBP13.21□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Kiaa1107Q80TK0 1369 aa13.21□□□□□ -0.29
Prpf39-201ENSMUST00000120580 Gtf2e1Q9D0D5 440 aa13.21□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Bcl9lQ67FY2 1494 aa13.21□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Srpk2O54781 681 aaKnown RBP13.2□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Slc4a2P13808 1237 aaKnown RBP13.19□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Slit2Q9R1B9 1521 aa13.19□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Pank3Q8R2W9 370 aa13.19□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Znf541Q0GGX2 1363 aa13.18□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Mapk8ip2Q9ERE9 830 aa13.18□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Trpm3Q5F4S9 1721 aa13.18□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Tnks1bp1P58871 1720 aa13.18□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Zscan10Q3URR7 782 aa13.16□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Inpp5dQ9ES52 1191 aa13.16□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Zfp142G5E869 1843 aa13.16□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Arid4bA2CG63 1314 aaKnown RBP13.15□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Atf7ipQ7TT18 1306 aa13.15□□□□□ -0.3
Prpf39-201ENSMUST00000120580 Fam184bQ0KK56 942 aa13.15□□□□□ -0.3
Prpf39-201ENSMUST00000120580 IbtkQ6ZPR6 1352 aaKnown RBP13.15□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Usp19Q3UJD6 1360 aa13.14□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Ahnak2E9PYB0 1738 aaKnown RBP13.14□□□□□ -0.31
Prpf39-201ENSMUST00000120580 NinlQ6ZQ12 1394 aa13.13□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Slc4a1apE9PX68 744 aa13.13□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Cdk19Q8BWD8 501 aa13.13□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Tmem2Q5FWI3 1383 aa13.13□□□□□ -0.31
Prpf39-201ENSMUST00000120580 CemipQ8BI06 1361 aa13.13□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Cdk12Q14AX6 1484 aaKnown RBP13.12□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Txndc2Q6P902 515 aa13.11□□□□□ -0.31
Prpf39-201ENSMUST00000120580 CenpjQ569L8 1344 aa13.11□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Atp2b2Q9R0K7 1198 aa13.11□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Plppr3Q7TPB0 716 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 HnrnpmQ9D0E1 729 aaKnown RBP13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Wdr66E9Q743 1299 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Psme1P97371 249 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Znf335A2A5K6 1337 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Arfgef2A2A5R2 1792 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Parp14Q2EMV9 1817 aa13.1□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Tmf1B9EKI3 1091 aa13.09□□□□□ -0.31
Prpf39-201ENSMUST00000120580 DccP70211 1447 aa13.09□□□□□ -0.31
Prpf39-201ENSMUST00000120580 SafbD3YXK2 937 aaKnown RBP13.08□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Shank3Q4ACU6 1730 aa13.08□□□□□ -0.31
Prpf39-201ENSMUST00000120580 Idi1P58044 227 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Nid2O88322 1403 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Rab3gap2Q8BMG7 1366 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Mink1Q9JM52 1308 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Exoc6Q8R313 802 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Stk26Q99JT2 416 aa13.08□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Adgrb1Q3UHD1 1582 aa13.07□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Utp14aQ640M1 767 aaKnown RBP13.07□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Aplp2Q06335 707 aa13.07□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Ppp2r1aQ76MZ3 589 aa13.07□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Ubr2Q6WKZ8 1755 aa13.06□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Safb2Q80YR5 991 aaKnown RBP13.06□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Idi2Q8BFZ6 227 aa13.06□□□□□ -0.32
Prpf39-201ENSMUST00000120580 Rpgrip1lQ8CG73 1264 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms