RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Pak3Q61036 559 aa31.64■■■□□ 2.66
Ubp1-203ENSMUST00000116492 Usp19Q3UJD6 1360 aa31.63■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Cul9Q80TT8 1865 aa31.63■■■□□ 2.65
Ubp1-203ENSMUST00000116492 IqubQ8CDK3 788 aa31.63■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Eif2ak4Q9QZ05 1648 aa31.6■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Ttc37F8VPK0 1563 aa31.6■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Rwdd1Q9CQK7 243 aa31.58■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Yeats2Q3TUF7 1407 aa31.58■■■□□ 2.65
Ubp1-203ENSMUST00000116492 Speer4f1Q9D5Q6 258 aa31.57■■■□□ 2.64
Ubp1-203ENSMUST00000116492 CenpjQ569L8 1344 aa31.57■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Adgrl3Q80TS3 1537 aa31.57■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Egfem1Q8C088 590 aa31.57■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Kiaa1107Q80TK0 1369 aa31.56■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Cnga1P29974 684 aa31.55■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Golga2Q921M4 999 aa31.55■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Ccdc30Q8BVF4 654 aa31.51■■■□□ 2.64
Ubp1-203ENSMUST00000116492 Synj2Q9D2G5 1434 aa31.5■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Uspl1Q3ULM6 1089 aa31.49■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Ralbp1Q62172 648 aa31.48■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Map4k4P97820 1233 aaKnown RBP31.48■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Cfap65Q3V0B4 1847 aa31.47■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Hfm1D3Z4R1 1434 aa31.47■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Scaf11E9PZM7 1456 aaKnown RBP31.47■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Ahdc1Q6PAL7 1594 aaKnown RBP31.46■■■□□ 2.63
Ubp1-203ENSMUST00000116492 IbtkQ6ZPR6 1352 aaKnown RBP31.46■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Prrc2bQ7TPM1 1486 aaKnown RBP31.46■■■□□ 2.63
Ubp1-203ENSMUST00000116492 Hecw2Q6I6G8 1578 aa31.43■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Rsph4aQ8BYM7 716 aa31.43■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Arhgap23Q69ZH9 1483 aa31.42■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Cald1E9QA15 768 aaKnown RBP31.42■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Prdm10Q3UTQ7 1184 aa31.41■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Neurod2Q62414 383 aa31.41■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Qser1A2BIE1 1698 aa31.39■■■□□ 2.62
Ubp1-203ENSMUST00000116492 GsdmaQ9EST1 446 aa31.39■■■□□ 2.62
Ubp1-203ENSMUST00000116492 Nrxn1Q9CS84 1514 aa31.38■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Ipo9Q91YE6 1041 aa31.37■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Kdm2bQ6P1G2 1309 aa31.37■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Zmym3Q9JLM4 1370 aa31.37■■■□□ 2.61
Ubp1-203ENSMUST00000116492 PtprmP28828 1452 aa31.35■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Adgrl1Q80TR1 1466 aa31.35■■■□□ 2.61
Ubp1-203ENSMUST00000116492 P2rx7Q9Z1M0 595 aa31.34■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Exosc9Q9JHI7 438 aaKnown RBP31.33■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Iqsec2Q5DU25 1478 aa31.33■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Shq1Q7TMX5 569 aa31.33■■■□□ 2.61
Ubp1-203ENSMUST00000116492 Stk26Q99JT2 416 aa31.31■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Med14A2ABV5 1459 aaKnown RBP31.31■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Ttll13A4Q9F6 804 aa31.3■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Atp1b4Q99ME6 356 aa31.3■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Ppp1r18Q8BQ30 594 aa31.27■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Ncbp3Q8BZR9 615 aaKnown RBP31.27■■■□□ 2.6
Ubp1-203ENSMUST00000116492 CltcQ68FD5 1675 aaKnown RBP31.26■■■□□ 2.6
Ubp1-203ENSMUST00000116492 Apbb1Q9QXJ1 710 aa31.24■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Cep170bQ80U49 1574 aa31.23■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Arhgef28P97433 1693 aa31.23■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Kif13aQ9EQW7 1749 aa31.22■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Afap1Q80YS6 731 aa31.21■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Naip7Q9JIB3 1402 aa31.21■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Gsto1O09131 240 aa31.21■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Itsn1Q9Z0R4 1714 aa31.2■■■□□ 2.59
Ubp1-203ENSMUST00000116492 Plekhg1F6S200 1446 aa31.2■■■□□ 2.59
Ubp1-203ENSMUST00000116492 EspnQ9ET47 871 aa31.18■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Tsen2Q6P7W5 460 aa31.18■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Q9D9H8 365 aa31.16■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Gas2l2Q5SSG4 860 aa31.16■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Utp14aQ640M1 767 aaKnown RBP31.15■■■□□ 2.58
Ubp1-203ENSMUST00000116492 U2af1Q9D883 239 aaKnown RBP31.15■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Smc5Q8CG46 1101 aaKnown RBP31.15■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Mapk8ip3Q9ESN9 1337 aa31.14■■■□□ 2.58
Ubp1-203ENSMUST00000116492 NpatQ8BMA5 1420 aa31.14■■■□□ 2.58
Ubp1-203ENSMUST00000116492 Zranb1Q7M760 708 aa31.12■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Atxn3Q9CVD2 355 aa31.12■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Atp2b2Q9R0K7 1198 aa31.12■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Chmp5Q9D7S9 219 aa31.12■■■□□ 2.57
Ubp1-203ENSMUST00000116492 AampJ3QN89 436 aa31.11■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Abca14E9Q8F8 1683 aa31.11■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Trim58Q5NCC9 485 aa31.1■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Cdk19Q8BWD8 501 aa31.1■■■□□ 2.57
Ubp1-203ENSMUST00000116492 B4galnt3Q6L8S8 986 aa31.1■■■□□ 2.57
Ubp1-203ENSMUST00000116492 NktrP30415 1453 aa31.1■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Znf521Q6KAS7 1311 aa31.1■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Apaf1O88879 1249 aa31.09■■■□□ 2.57
Ubp1-203ENSMUST00000116492 FanciQ8K368 1330 aa31.09■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Zc3h13E9Q784 1729 aaKnown RBP31.07■■■□□ 2.57
Ubp1-203ENSMUST00000116492 Fam135bQ9DAI6 1403 aa31.07■■■□□ 2.56
Ubp1-203ENSMUST00000116492 Ciz1Q8VEH2 845 aa31.06■■■□□ 2.56
Ubp1-203ENSMUST00000116492 RictorQ6QI06 1708 aa31.05■■■□□ 2.56
Ubp1-203ENSMUST00000116492 NinlQ6ZQ12 1394 aa31.05■■■□□ 2.56
Ubp1-203ENSMUST00000116492 Tspyl2Q7TQI8 677 aa31.04■■■□□ 2.56
Ubp1-203ENSMUST00000116492 PplQ9R269 1755 aa31.03■■■□□ 2.56
Ubp1-203ENSMUST00000116492 Pank1Q8K4K6 548 aa31.02■■■□□ 2.56
Ubp1-203ENSMUST00000116492 Znf541Q0GGX2 1363 aa31.01■■■□□ 2.56
Ubp1-203ENSMUST00000116492 Ksr2Q3UVC0 959 aa31■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Ccar1Q8CH18 1146 aaKnown RBP31■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Dbr1Q923B1 550 aa30.98■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Ercc6l2Q9JIM3 1537 aa30.98■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Dusp27Q148W8 1138 aa30.97■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Dip2aQ8BWT5 1523 aa30.97■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Nwd1A6H603 1563 aa30.97■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Ccdc27Q3V036 639 aa30.97■■■□□ 2.55
Ubp1-203ENSMUST00000116492 Uhrf1bp1B2KF50 1429 aa30.93■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms