RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Pak3Q61036 559 aa31,64■■■□□ 2,66
Ubp1-203ENSMUST00000116492 Usp19Q3UJD6 1360 aa31,63■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Cul9Q80TT8 1865 aa31,63■■■□□ 2,65
Ubp1-203ENSMUST00000116492 IqubQ8CDK3 788 aa31,63■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Eif2ak4Q9QZ05 1648 aa31,6■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Ttc37F8VPK0 1563 aa31,6■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Rwdd1Q9CQK7 243 aa31,58■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Yeats2Q3TUF7 1407 aa31,58■■■□□ 2,65
Ubp1-203ENSMUST00000116492 Speer4f1Q9D5Q6 258 aa31,57■■■□□ 2,64
Ubp1-203ENSMUST00000116492 CenpjQ569L8 1344 aa31,57■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Adgrl3Q80TS3 1537 aa31,57■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Egfem1Q8C088 590 aa31,57■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Kiaa1107Q80TK0 1369 aa31,56■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Cnga1P29974 684 aa31,55■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Golga2Q921M4 999 aa31,55■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Ccdc30Q8BVF4 654 aa31,51■■■□□ 2,64
Ubp1-203ENSMUST00000116492 Synj2Q9D2G5 1434 aa31,5■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Uspl1Q3ULM6 1089 aa31,49■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Ralbp1Q62172 648 aa31,48■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Map4k4P97820 1233 aaKnown RBP31,48■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Cfap65Q3V0B4 1847 aa31,47■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Hfm1D3Z4R1 1434 aa31,47■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Scaf11E9PZM7 1456 aaKnown RBP31,47■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Ahdc1Q6PAL7 1594 aaKnown RBP31,46■■■□□ 2,63
Ubp1-203ENSMUST00000116492 IbtkQ6ZPR6 1352 aaKnown RBP31,46■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Prrc2bQ7TPM1 1486 aaKnown RBP31,46■■■□□ 2,63
Ubp1-203ENSMUST00000116492 Hecw2Q6I6G8 1578 aa31,43■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Rsph4aQ8BYM7 716 aa31,43■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Arhgap23Q69ZH9 1483 aa31,42■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Cald1E9QA15 768 aaKnown RBP31,42■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Prdm10Q3UTQ7 1184 aa31,41■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Neurod2Q62414 383 aa31,41■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Qser1A2BIE1 1698 aa31,39■■■□□ 2,62
Ubp1-203ENSMUST00000116492 GsdmaQ9EST1 446 aa31,39■■■□□ 2,62
Ubp1-203ENSMUST00000116492 Nrxn1Q9CS84 1514 aa31,38■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Ipo9Q91YE6 1041 aa31,37■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Kdm2bQ6P1G2 1309 aa31,37■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Zmym3Q9JLM4 1370 aa31,37■■■□□ 2,61
Ubp1-203ENSMUST00000116492 PtprmP28828 1452 aa31,35■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Adgrl1Q80TR1 1466 aa31,35■■■□□ 2,61
Ubp1-203ENSMUST00000116492 P2rx7Q9Z1M0 595 aa31,34■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Exosc9Q9JHI7 438 aaKnown RBP31,33■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Iqsec2Q5DU25 1478 aa31,33■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Shq1Q7TMX5 569 aa31,33■■■□□ 2,61
Ubp1-203ENSMUST00000116492 Stk26Q99JT2 416 aa31,31■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Med14A2ABV5 1459 aaKnown RBP31,31■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Ttll13A4Q9F6 804 aa31,3■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Atp1b4Q99ME6 356 aa31,3■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Ppp1r18Q8BQ30 594 aa31,27■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Ncbp3Q8BZR9 615 aaKnown RBP31,27■■■□□ 2,6
Ubp1-203ENSMUST00000116492 CltcQ68FD5 1675 aaKnown RBP31,26■■■□□ 2,6
Ubp1-203ENSMUST00000116492 Apbb1Q9QXJ1 710 aa31,24■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Cep170bQ80U49 1574 aa31,23■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Arhgef28P97433 1693 aa31,23■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Kif13aQ9EQW7 1749 aa31,22■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Afap1Q80YS6 731 aa31,21■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Naip7Q9JIB3 1402 aa31,21■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Gsto1O09131 240 aa31,21■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Itsn1Q9Z0R4 1714 aa31,2■■■□□ 2,59
Ubp1-203ENSMUST00000116492 Plekhg1F6S200 1446 aa31,2■■■□□ 2,59
Ubp1-203ENSMUST00000116492 EspnQ9ET47 871 aa31,18■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Tsen2Q6P7W5 460 aa31,18■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Q9D9H8 365 aa31,16■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Gas2l2Q5SSG4 860 aa31,16■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Utp14aQ640M1 767 aaKnown RBP31,15■■■□□ 2,58
Ubp1-203ENSMUST00000116492 U2af1Q9D883 239 aaKnown RBP31,15■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Smc5Q8CG46 1101 aaKnown RBP31,15■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Mapk8ip3Q9ESN9 1337 aa31,14■■■□□ 2,58
Ubp1-203ENSMUST00000116492 NpatQ8BMA5 1420 aa31,14■■■□□ 2,58
Ubp1-203ENSMUST00000116492 Zranb1Q7M760 708 aa31,12■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Atxn3Q9CVD2 355 aa31,12■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Atp2b2Q9R0K7 1198 aa31,12■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Chmp5Q9D7S9 219 aa31,12■■■□□ 2,57
Ubp1-203ENSMUST00000116492 AampJ3QN89 436 aa31,11■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Abca14E9Q8F8 1683 aa31,11■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Trim58Q5NCC9 485 aa31,1■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Cdk19Q8BWD8 501 aa31,1■■■□□ 2,57
Ubp1-203ENSMUST00000116492 B4galnt3Q6L8S8 986 aa31,1■■■□□ 2,57
Ubp1-203ENSMUST00000116492 NktrP30415 1453 aa31,1■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Znf521Q6KAS7 1311 aa31,1■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Apaf1O88879 1249 aa31,09■■■□□ 2,57
Ubp1-203ENSMUST00000116492 FanciQ8K368 1330 aa31,09■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Zc3h13E9Q784 1729 aaKnown RBP31,07■■■□□ 2,57
Ubp1-203ENSMUST00000116492 Fam135bQ9DAI6 1403 aa31,07■■■□□ 2,56
Ubp1-203ENSMUST00000116492 Ciz1Q8VEH2 845 aa31,06■■■□□ 2,56
Ubp1-203ENSMUST00000116492 RictorQ6QI06 1708 aa31,05■■■□□ 2,56
Ubp1-203ENSMUST00000116492 NinlQ6ZQ12 1394 aa31,05■■■□□ 2,56
Ubp1-203ENSMUST00000116492 Tspyl2Q7TQI8 677 aa31,04■■■□□ 2,56
Ubp1-203ENSMUST00000116492 PplQ9R269 1755 aa31,03■■■□□ 2,56
Ubp1-203ENSMUST00000116492 Pank1Q8K4K6 548 aa31,02■■■□□ 2,56
Ubp1-203ENSMUST00000116492 Znf541Q0GGX2 1363 aa31,01■■■□□ 2,56
Ubp1-203ENSMUST00000116492 Ksr2Q3UVC0 959 aa31■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Ccar1Q8CH18 1146 aaKnown RBP31■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Dbr1Q923B1 550 aa30,98■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Ercc6l2Q9JIM3 1537 aa30,98■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Dusp27Q148W8 1138 aa30,97■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Dip2aQ8BWT5 1523 aa30,97■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Nwd1A6H603 1563 aa30,97■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Ccdc27Q3V036 639 aa30,97■■■□□ 2,55
Ubp1-203ENSMUST00000116492 Uhrf1bp1B2KF50 1429 aa30,93■■■□□ 2,54
Retrieved 100 of 22,080 RNA–protein pairs in 13,9 ms