RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Adamts13Q769J6 1426 aa10.43□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Neurl4Q5NCX5 1563 aa10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Rabep1O35551 862 aa10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 KnstrnQ9D9Z1 312 aaKnown RBP10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Ppp1r9bQ6R891 817 aaKnown RBP10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 AnkarA2RT91 1465 aa10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Plcd4Q8K3R3 807 aa10.42□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Usp19Q3UJD6 1360 aa10.41□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Plcb2A3KGF7 1181 aa10.41□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Tmc1Q8R4P5 757 aa10.41□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Ccdc60Q8C4J0 545 aa10.41□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Usp54Q8BL06 1588 aaKnown RBP10.41□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Gas2l2Q5SSG4 860 aa10.4□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Tmco5bQ80X59 307 aa10.4□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Tnpo1Q8BFY9 898 aaKnown RBP10.4□□□□□ -0.74
Bdnf-208ENSMUST00000111049 AU015836B2RUM3 263 aa10.4□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Col17a1Q07563 1470 aa10.4□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Dnttip2Q8R2M2 758 aaKnown RBP10.4□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Chmp4bQ9D8B3 224 aaKnown RBP10.39□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Abcc1O35379 1528 aa10.39□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Duxf3A0A0N4SV92 674 aa10.39□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Dusp27Q148W8 1138 aa10.39□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Sptbn5F6UCX4 1208 aa10.39□□□□□ -0.75
Bdnf-208ENSMUST00000111049 GapdhsQ64467 440 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 DekQ7TNV0 380 aaKnown RBP10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Ciz1Q8VEH2 845 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Nphp4P59240 1425 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Hecw1Q8K4P8 1604 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Ecm2Q5FW85 670 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 G3bp1P97855 465 aaKnown RBP10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Pola1P33609 1465 aa10.38□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Abcc3B2RX12 1523 aa10.37□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Clasp1Q80TV8 1535 aaKnown RBP10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Kiaa1107Q80TK0 1369 aa10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Shq1Q7TMX5 569 aa10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Slc52a2Q9D8F3 450 aa10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Kdm5aQ3UXZ9 1690 aa10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Cavin4A2AMM0 362 aa10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Utp14aQ640M1 767 aaKnown RBP10.36□□□□□ -0.75
Bdnf-208ENSMUST00000111049 AatkQ80YE4 1365 aa10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Rbm25B2RY56 838 aaKnown RBP10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 4933402E13RikQ9D4D2 429 aa10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Zcchc11B2RX14 1644 aaKnown RBP10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Rlbp1Q9Z275 317 aa10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 IbtkQ6ZPR6 1352 aaKnown RBP10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Birc3O08863 600 aa10.35□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Tubgcp6G5E8P0 1769 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Gprasp1Q5U4C1 1347 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Fam135bQ9DAI6 1403 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Gsto1O09131 240 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 BccipQ9CWI3 316 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 InsrP15208 1372 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Fgd1P52734 960 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 Cdc42bpbQ7TT50 1713 aa10.34□□□□□ -0.75
Bdnf-208ENSMUST00000111049 SkilQ60665 675 aa10.33□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Arid3aQ62431 601 aa10.33□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Trim44Q9QXA7 346 aa10.33□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Ccdc171E9Q1U1 1324 aa10.33□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Robo2Q7TPD3 1470 aa10.33□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Swt1Q9DBQ9 907 aa10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Vsig10D3YX43 558 aa10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Nutm1Q8BHP2 1126 aa10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Senp3Q9EP97 568 aaKnown RBP10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Pdcd11Q6NS46 1862 aaKnown RBP10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 U2surpQ6NV83 1029 aaKnown RBP10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 GorabQ8BRM2 368 aa10.32□□□□□ -0.76
Bdnf-208ENSMUST00000111049 ShprhQ7TPQ3 1674 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Ythdc2B2RR83 1445 aaKnown RBP10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Tbc1d32Q3URV1 1296 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Kif18aQ91WD7 886 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Myo3aQ8K3H5 1613 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Itsn2Q9Z0R6 1659 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Nectin2P32507 530 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Maco1Q7TQE6 664 aaKnown RBP10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 HnrnpuQ8VEK3 800 aaKnown RBP10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Phlpp2Q8BXA7 1320 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 NhsB1AV60 1647 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Ipo4Q8VI75 1082 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 TimelessQ9R1X4 1197 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 OvosQ3UU35 1456 aa10.31□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Myom2Q14BI5 1463 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Hs1bp3Q3TC93 395 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Atp2b2Q9R0K7 1198 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Znf608Q56A10 1511 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Znf518aB2RRF6 1478 aaKnown RBP10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Scaf11E9PZM7 1456 aaKnown RBP10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Rfx1P48377 963 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Rsph3aQ3UFY4 516 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Cog6Q8R3I3 657 aa10.3□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Uggt2E9Q4X2 1504 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Cep152A2AUM9 1736 aaKnown RBP10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 PalldQ9ET54 1408 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 1700019A02RikA0A087WPV9 146 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 CastP51125 788 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Plin1Q8CGN5 517 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Pknox2Q8BG99 474 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Abca8bQ8K440 1620 aa10.29□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Kiaa1210E9Q0C6 1637 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Skint5A7XUY5 1461 aa10.28□□□□□ -0.76
Bdnf-208ENSMUST00000111049 Znf521Q6KAS7 1311 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms