RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Atp2b2Q9R0K7 1198 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 PnisrA2AJT4 805 aaKnown RBP8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Gcom1E9PZ54 550 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Kif3aP28741 701 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 MyzapQ3UIJ9 466 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Polr1aO35134 1717 aaKnown RBP8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Rnf214Q8BFU3 668 aaKnown RBP8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Me1P06801 572 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Usp48Q3V0C5 1052 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Prm3Q62100 101 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Chrna2Q91X60 512 aa8.11□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Zfp644E9QA22 1323 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Gtf2f1Q3THK3 508 aaKnown RBP8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 March6Q6ZQ89 909 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ccdc171E9Q1U1 1324 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ttll13A4Q9F6 804 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 SkilQ60665 675 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 IbspQ61711 324 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ints3Q7TPD0 1041 aaKnown RBP8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ubxn4Q8VCH8 506 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Trim29Q8R2Q0 587 aa8.1□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ift140E9PY46 1464 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 EzrP26040 586 aaKnown RBP8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Rufy1Q8BIJ7 712 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ncbp3Q8BZR9 615 aaKnown RBP8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Q9D9H8 365 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Psma5Q9Z2U1 241 aaKnown RBP8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 TatQ8QZR1 454 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ipo4Q8VI75 1082 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 NaspQ99MD9 773 aaKnown RBP8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Cc2d2aQ8CFW7 1633 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ppp2r3aB2RXC8 1150 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Pnmal2G3X9N3 661 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Pde4cQ3UEI1 686 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Pabpn1Q8CCS6 302 aaKnown RBP8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Gm10471E9Q1C7 252 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Ppp2r1aQ76MZ3 589 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Rab3gap2Q8BMG7 1366 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Eva1cP58659 440 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Mcm2P97310 904 aa8.09□□□□□ -1.11
Scn8a-205ENSMUST00000108910 Stk11ipQ3TAA7 1072 aa8.09□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Zfp444Q3TDV8 331 aaKnown RBP8.09□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Q7TT23 1179 aa8.09□□□□□ -1.12
Scn8a-205ENSMUST00000108910 1700010I14RikQ7TPG0 532 aa8.08□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Arhgap5P97393 1501 aa8.08□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Hdgfl1Q2VPR5 283 aa8.08□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Bcl11bQ99PV8 884 aa8.08□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Cd109Q8R422 1442 aa8.08□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Znf710Q3U288 666 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Zkscan2G3X952 960 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Fnbp4Q6ZQ03 1031 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Top2aQ01320 1528 aaKnown RBP8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Iqgap2Q3UQ44 1575 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Necab1Q8BG18 352 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 HmmrQ00547 794 aaKnown RBP8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Paf1Q8K2T8 535 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Sirt1Q923E4 737 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 UvssaQ9D479 717 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 ScribQ80U72 1612 aa8.07□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Map3k5O35099 1380 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Abl1P00520 1123 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 AnlnQ8K298 1121 aaKnown RBP8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Nap1l1P28656 391 aaKnown RBP8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 MpripP97434 1024 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Cavin4A2AMM0 362 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Anp32eP97822 260 aaKnown RBP8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Tnpo1Q8BFY9 898 aaKnown RBP8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Prdm16A2A935 1275 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Sycp1Q62209 993 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Zpr1Q62384 459 aa8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Gnl3lQ6PGG6 577 aaKnown RBP8.06□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Atf3Q60765 181 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Rbm28Q8CGC6 750 aaKnown RBP8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Myom3A2ABU4 1439 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Slc4a2P13808 1237 aaKnown RBP8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 PdcQ9QW08 244 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Znf704Q9ERQ3 566 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Pknox2Q8BG99 474 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Sytl4Q9R0Q1 673 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Rad54l2Q99NG0 1466 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Apaf1O88879 1249 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Agtpbp1Q641K1 1218 aa8.05□□□□□ -1.12
Scn8a-205ENSMUST00000108910 HypkQ9CR41 129 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Babam1Q3UI43 333 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 TefQ9JLC6 301 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Ppp4r3bQ922R5 820 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Naip1Q9QWK5 1403 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Cnnm1Q0GA42 951 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Zranb3Q6NZP1 1069 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Gnai2P08752 355 aaKnown RBP8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Nphp1Q9QY53 687 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Fkbp4P30416 458 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Cabp2Q9JLK4 216 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Q9D9S1 216 aa8.04□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Mns1Q61884 491 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Stk38Q91VJ4 465 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Smg7Q5RJH6 1138 aaKnown RBP8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Tmc1Q8R4P5 757 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Fmnl2A2APV2 1086 aa8.03□□□□□ -1.12
Scn8a-205ENSMUST00000108910 Zkscan1Q8BGS3 561 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms