RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 NexnQ7TPW1 607 aa13.46□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Rabep1O35551 862 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Gabpb2P81069 414 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Rnf20Q5DTM8 973 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Rab3gap2Q8BMG7 1366 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Dennd6aQ8BH65 605 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 NexmifQ5DTT1 1515 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Becn1O88597 448 aa13.45□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Srek1Q8BZX4 494 aaKnown RBP13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Fgd6Q69ZL1 1399 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cplx2P84086 134 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Erc2Q6PH08 957 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Tpm4Q6IRU2 248 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cyp46a1Q9WVK8 500 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cplx1P63040 134 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Bicd2Q921C5 820 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Smc3Q9CW03 1217 aaKnown RBP13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Gm14025A2AP89 1413 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Nek4Q9Z1J2 792 aa13.44□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Sf3b2Q3UJB0 878 aaKnown RBP13.43□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Mad1l1Q9WTX8 717 aaKnown RBP13.43□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Smg7Q5RJH6 1138 aaKnown RBP13.43□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cnnm1Q0GA42 951 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Tpm2P58774 284 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Wdr78E9PYY5 807 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Slc4a2P13808 1237 aaKnown RBP13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Nol12Q8BG17 217 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Fkbp4P30416 458 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Plb1Q3TTY0 1478 aa13.42□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Stk11ipQ3TAA7 1072 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Evc2Q8K1G2 1220 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Rec8Q8C5S7 591 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Noc3lQ8VI84 807 aaKnown RBP13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Atl3Q91YH5 541 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 PogkQ80TC5 607 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 TefQ9JLC6 301 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Drc7Q6V3W6 876 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cavin4A2AMM0 362 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Usp48Q3V0C5 1052 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 HypkQ9CR41 129 aa13.41□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Prkrip1Q9CWV6 186 aaKnown RBP13.4□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Ddrgk1Q80WW9 315 aa13.4□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Samd1D3YXK1 519 aa13.4□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Ddx54Q8K4L0 874 aaKnown RBP13.4□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Abl1P00520 1123 aa13.4□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Gm21698A0A087WQP8 267 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gm21671G3UY31 267 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 AampJ3QN89 436 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Kif4P33174 1231 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Hnrnpul1Q8VDM6 859 aaKnown RBP13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 SynmQ70IV5 1561 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ccdc171E9Q1U1 1324 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 VgfQ0VGU4 617 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Zfp444Q3TDV8 331 aaKnown RBP13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Tpm1P58771 284 aa13.39□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ccdc183A2AJB1 534 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 BicraF8VPZ9 1578 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gripap1Q8VD04 806 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Znf710Q3U288 666 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Fmnl2A2APV2 1086 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 SkilQ60665 675 aa13.38□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Wdr62Q3U3T8 1523 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ttll13A4Q9F6 804 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Rbm5Q91YE7 815 aaKnown RBP13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Cetn4Q8K4K1 168 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Me1P06801 572 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Glipr1l2Q9CQ35 332 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 A2mQ6GQT1 1474 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Arid4aF8VPQ2 1261 aaKnown RBP13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 4933402E13RikQ9D4D2 429 aa13.37□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Il16O54824 1322 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ppp2r3aB2RXC8 1150 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ush1cQ9ES64 910 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Taok2Q6ZQ29 1240 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gprasp1Q5U4C1 1347 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ggnbp2Q5SV77 696 aa13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Fam193aQ8CGI1 1231 aaKnown RBP13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Ccdc43Q9CR29 222 aaKnown RBP13.36□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Neo1P97798 1493 aa13.35□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gtf2f1Q3THK3 508 aaKnown RBP13.35□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gnai2P08752 355 aaKnown RBP13.35□□□□□ -0.27
Scn8a-203ENSMUST00000108908 HnrnpmQ9D0E1 729 aaKnown RBP13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Kcnh8P59111 1102 aa13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gnl3lQ6PGG6 577 aaKnown RBP13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 PalmQ9Z0P4 383 aa13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Gpatch3Q8BIY1 525 aa13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 CadpsQ80TJ1 1355 aa13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Speer4bQ9D9F7 267 aa13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 SetQ9EQU5 289 aaKnown RBP13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 Odf2A3KGV1 830 aaKnown RBP13.34□□□□□ -0.27
Scn8a-203ENSMUST00000108908 A0A1L1SQF0 893 aa13.33□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Dusp27Q148W8 1138 aa13.33□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Hook1Q8BIL5 728 aa13.33□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Psma5Q9Z2U1 241 aaKnown RBP13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Magi1Q6RHR9 1471 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Babam1Q3UI43 333 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Klf15Q9EPW2 415 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm21663A0A0G2JE01 267 aa13.32□□□□□ -0.28
Scn8a-203ENSMUST00000108908 Gm7361D3Z6R1 267 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 98.3 ms