RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 CenpjQ569L8 1344 aa19.92■□□□□ 0.78
Nup88-202ENSMUST00000108530 Arhgef28P97433 1693 aa19.91■□□□□ 0.78
Nup88-202ENSMUST00000108530 Psme1P97371 249 aa19.91■□□□□ 0.78
Nup88-202ENSMUST00000108530 Ofd1Q80Z25 1017 aa19.89■□□□□ 0.77
Nup88-202ENSMUST00000108530 Med14A2ABV5 1459 aaKnown RBP19.89■□□□□ 0.77
Nup88-202ENSMUST00000108530 MaddQ80U28 1577 aa19.88■□□□□ 0.77
Nup88-202ENSMUST00000108530 InsrP15208 1372 aa19.87■□□□□ 0.77
Nup88-202ENSMUST00000108530 IghaA0A0A6YXW6 389 aa19.87■□□□□ 0.77
Nup88-202ENSMUST00000108530 Exosc9Q9JHI7 438 aaKnown RBP19.87■□□□□ 0.77
Nup88-202ENSMUST00000108530 Rab3gap2Q8BMG7 1366 aa19.86■□□□□ 0.77
Nup88-202ENSMUST00000108530 Tex14Q7M6U3 1450 aa19.86■□□□□ 0.77
Nup88-202ENSMUST00000108530 Atp2b2Q9R0K7 1198 aa19.86■□□□□ 0.77
Nup88-202ENSMUST00000108530 Arid4bA2CG63 1314 aaKnown RBP19.85■□□□□ 0.77
Nup88-202ENSMUST00000108530 Dnajc5P60904 198 aa19.85■□□□□ 0.77
Nup88-202ENSMUST00000108530 Zc3h13E9Q784 1729 aaKnown RBP19.83■□□□□ 0.76
Nup88-202ENSMUST00000108530 SafbD3YXK2 937 aaKnown RBP19.83■□□□□ 0.76
Nup88-202ENSMUST00000108530 Esx1O88933 382 aa19.81■□□□□ 0.76
Nup88-202ENSMUST00000108530 Rad21Q61550 635 aaKnown RBP19.8■□□□□ 0.76
Nup88-202ENSMUST00000108530 Cdk19Q8BWD8 501 aa19.8■□□□□ 0.76
Nup88-202ENSMUST00000108530 Nlrp6Q91WS2 869 aa19.8■□□□□ 0.76
Nup88-202ENSMUST00000108530 MyclP10166 368 aa19.79■□□□□ 0.76
Nup88-202ENSMUST00000108530 Mak16Q8BGS0 296 aaKnown RBP19.79■□□□□ 0.76
Nup88-202ENSMUST00000108530 PplQ9R269 1755 aa19.79■□□□□ 0.76
Nup88-202ENSMUST00000108530 Chd2E9PZM4 1827 aaKnown RBP19.78■□□□□ 0.76
Nup88-202ENSMUST00000108530 Abca14E9Q8F8 1683 aa19.78■□□□□ 0.76
Nup88-202ENSMUST00000108530 Gsto1O09131 240 aa19.77■□□□□ 0.75
Nup88-202ENSMUST00000108530 Gprasp1Q5U4C1 1347 aa19.76■□□□□ 0.75
Nup88-202ENSMUST00000108530 Eif2ak4Q9QZ05 1648 aa19.76■□□□□ 0.75
Nup88-202ENSMUST00000108530 Dip2aQ8BWT5 1523 aa19.75■□□□□ 0.75
Nup88-202ENSMUST00000108530 Zfp444Q3TDV8 331 aaKnown RBP19.75■□□□□ 0.75
Nup88-202ENSMUST00000108530 Calr4Q3TQS0 420 aa19.73■□□□□ 0.75
Nup88-202ENSMUST00000108530 Znf316Q6PGE4 1016 aa19.73■□□□□ 0.75
Nup88-202ENSMUST00000108530 Plekhg1F6S200 1446 aa19.72■□□□□ 0.75
Nup88-202ENSMUST00000108530 CrbnQ8C7D2 445 aa19.71■□□□□ 0.75
Nup88-202ENSMUST00000108530 HnrnpmQ9D0E1 729 aaKnown RBP19.71■□□□□ 0.75
Nup88-202ENSMUST00000108530 4930407I10RikD3Z5T8 1512 aa19.71■□□□□ 0.75
Nup88-202ENSMUST00000108530 L3mbtl2P59178 703 aa19.7■□□□□ 0.74
Nup88-202ENSMUST00000108530 Dip2bQ3UH60 1574 aa19.7■□□□□ 0.74
Nup88-202ENSMUST00000108530 NktrP30415 1453 aa19.69■□□□□ 0.74
Nup88-202ENSMUST00000108530 P2rx7Q9Z1M0 595 aa19.69■□□□□ 0.74
Nup88-202ENSMUST00000108530 Gemin5Q8BX17 1502 aaKnown RBP19.69■□□□□ 0.74
Nup88-202ENSMUST00000108530 MlecQ6ZQI3 291 aaKnown RBP19.68■□□□□ 0.74
Nup88-202ENSMUST00000108530 Nwd1A6H603 1563 aa19.67■□□□□ 0.74
Nup88-202ENSMUST00000108530 Atf7ipQ7TT18 1306 aa19.67■□□□□ 0.74
Nup88-202ENSMUST00000108530 Scaf11E9PZM7 1456 aaKnown RBP19.67■□□□□ 0.74
Nup88-202ENSMUST00000108530 Nrxn1Q9CS84 1514 aa19.67■□□□□ 0.74
Nup88-202ENSMUST00000108530 NinlQ6ZQ12 1394 aa19.66■□□□□ 0.74
Nup88-202ENSMUST00000108530 Kiaa1107Q80TK0 1369 aa19.65■□□□□ 0.74
Nup88-202ENSMUST00000108530 Cald1E9QA15 768 aaKnown RBP19.65■□□□□ 0.74
Nup88-202ENSMUST00000108530 Slit3Q9WVB4 1523 aa19.64■□□□□ 0.73
Nup88-202ENSMUST00000108530 Map3k19E9Q3S4 1311 aa19.64■□□□□ 0.73
Nup88-202ENSMUST00000108530 FanciQ8K368 1330 aa19.63■□□□□ 0.73
Nup88-202ENSMUST00000108530 PzpQ61838 1495 aa19.62■□□□□ 0.73
Nup88-202ENSMUST00000108530 KdrP35918 1367 aa19.62■□□□□ 0.73
Nup88-202ENSMUST00000108530 IbtkQ6ZPR6 1352 aaKnown RBP19.62■□□□□ 0.73
Nup88-202ENSMUST00000108530 Erbb3Q61526 1339 aa19.61■□□□□ 0.73
Nup88-202ENSMUST00000108530 Kif16bB1AVY7 1312 aa19.6■□□□□ 0.73
Nup88-202ENSMUST00000108530 Fam71e1A1L3C1 212 aa19.59■□□□□ 0.73
Nup88-202ENSMUST00000108530 Golga2Q921M4 999 aa19.59■□□□□ 0.73
Nup88-202ENSMUST00000108530 Tcerg1Q8CGF7 1100 aaKnown RBP19.58■□□□□ 0.73
Nup88-202ENSMUST00000108530 Usp19Q3UJD6 1360 aa19.58■□□□□ 0.73
Nup88-202ENSMUST00000108530 Adgrl1Q80TR1 1466 aa19.58■□□□□ 0.73
Nup88-202ENSMUST00000108530 Neurod2Q62414 383 aa19.58■□□□□ 0.72
Nup88-202ENSMUST00000108530 GsdmaQ9EST1 446 aa19.58■□□□□ 0.72
Nup88-202ENSMUST00000108530 Speer4f1Q9D5Q6 258 aa19.57■□□□□ 0.72
Nup88-202ENSMUST00000108530 Usp32F8VPZ3 1604 aa19.57■□□□□ 0.72
Nup88-202ENSMUST00000108530 Cps1Q8C196 1500 aa19.56■□□□□ 0.72
Nup88-202ENSMUST00000108530 GphnQ8BUV3 769 aaKnown RBP19.56■□□□□ 0.72
Nup88-202ENSMUST00000108530 Pik3c2bE9QAN8 1632 aa19.55■□□□□ 0.72
Nup88-202ENSMUST00000108530 Q3UJC8 639 aa19.55■□□□□ 0.72
Nup88-202ENSMUST00000108530 NgefQ8CHT1 710 aa19.55■□□□□ 0.72
Nup88-202ENSMUST00000108530 Myt1Q8CFC2 1127 aa19.54■□□□□ 0.72
Nup88-202ENSMUST00000108530 Kank1E9Q238 1360 aa19.53■□□□□ 0.72
Nup88-202ENSMUST00000108530 Tsen2Q6P7W5 460 aa19.52■□□□□ 0.72
Nup88-202ENSMUST00000108530 U2af1Q9D883 239 aaKnown RBP19.52■□□□□ 0.72
Nup88-202ENSMUST00000108530 Ecm2Q5FW85 670 aa19.52■□□□□ 0.72
Nup88-202ENSMUST00000108530 Idi2Q8BFZ6 227 aa19.52■□□□□ 0.72
Nup88-202ENSMUST00000108530 Pik3r4Q8VD65 1358 aa19.5■□□□□ 0.71
Nup88-202ENSMUST00000108530 Birc3O08863 600 aa19.5■□□□□ 0.71
Nup88-202ENSMUST00000108530 Apaf1O88879 1249 aa19.5■□□□□ 0.71
Nup88-202ENSMUST00000108530 Sox12Q04890 314 aa19.5■□□□□ 0.71
Nup88-202ENSMUST00000108530 Uspl1Q3ULM6 1089 aa19.49■□□□□ 0.71
Nup88-202ENSMUST00000108530 Bcl9Q9D219 1425 aa19.49■□□□□ 0.71
Nup88-202ENSMUST00000108530 Topaz1E5FYH1 1653 aa19.47■□□□□ 0.71
Nup88-202ENSMUST00000108530 Kcnh8P59111 1102 aa19.47■□□□□ 0.71
Nup88-202ENSMUST00000108530 Ccdc30Q8BVF4 654 aa19.47■□□□□ 0.71
Nup88-202ENSMUST00000108530 PtpruB1AUH1 1446 aa19.47■□□□□ 0.71
Nup88-202ENSMUST00000108530 Alpk3Q924C5 1678 aa19.46■□□□□ 0.71
Nup88-202ENSMUST00000108530 Arap3Q8R5G7 1538 aa19.46■□□□□ 0.71
Nup88-202ENSMUST00000108530 Rreb1Q3UH06 1700 aaKnown RBP19.45■□□□□ 0.7
Nup88-202ENSMUST00000108530 Map4k4P97820 1233 aaKnown RBP19.45■□□□□ 0.7
Nup88-202ENSMUST00000108530 CatipB9EKE5 520 aa19.44■□□□□ 0.7
Nup88-202ENSMUST00000108530 Atxn3Q9CVD2 355 aa19.44■□□□□ 0.7
Nup88-202ENSMUST00000108530 Tmem94Q7TSH8 1360 aa19.44■□□□□ 0.7
Nup88-202ENSMUST00000108530 Tnrc6bQ8BKI2 1810 aaKnown RBP19.44■□□□□ 0.7
Nup88-202ENSMUST00000108530 Gas2l2Q5SSG4 860 aa19.43■□□□□ 0.7
Nup88-202ENSMUST00000108530 Gm10563F6WIE4 79 aa19.43■□□□□ 0.7
Nup88-202ENSMUST00000108530 Idi1P58044 227 aa19.43■□□□□ 0.7
Nup88-202ENSMUST00000108530 Slc12a5Q91V14 1138 aa19.42■□□□□ 0.7
Nup88-202ENSMUST00000108530 Upf2A2AT37 1269 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms