RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Cnga1P29974 684 aa14.83□□□□□ -0.03
Ebf3-202ENSMUST00000106118 Wdr43Q6ZQL4 677 aaKnown RBP14.83□□□□□ -0.03
Ebf3-202ENSMUST00000106118 ArxO35085 564 aa14.82□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Utp14aQ640M1 767 aaKnown RBP14.82□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Naip7Q9JIB3 1402 aa14.82□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Eif2ak4Q9QZ05 1648 aa14.82□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Arhgap23Q69ZH9 1483 aa14.81□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Q9D9H8 365 aa14.81□□□□□ -0.04
Ebf3-202ENSMUST00000106118 MaddQ80U28 1577 aa14.81□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Atf7ipQ7TT18 1306 aa14.81□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Qser1A2BIE1 1698 aa14.8□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Psme1P97371 249 aa14.8□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Myom1Q62234 1667 aaKnown RBP14.8□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Txndc2Q6P902 515 aa14.79□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Gprasp1Q5U4C1 1347 aa14.79□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Plppr3Q7TPB0 716 aa14.78□□□□□ -0.04
Ebf3-202ENSMUST00000106118 RictorQ6QI06 1708 aa14.78□□□□□ -0.04
Ebf3-202ENSMUST00000106118 PtprmP28828 1452 aa14.78□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Slc4a3P16283 1227 aa14.78□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Prdm10Q3UTQ7 1184 aa14.78□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Plekhg1F6S200 1446 aa14.77□□□□□ -0.04
Ebf3-202ENSMUST00000106118 Mink1Q9JM52 1308 aa14.77□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Gsto1O09131 240 aa14.76□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Ift172Q6VH22 1749 aa14.76□□□□□ -0.05
Ebf3-202ENSMUST00000106118 NeflP08551 543 aa14.75□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Rad21Q61550 635 aaKnown RBP14.75□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Atp2b2Q9R0K7 1198 aa14.75□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Kif13aQ9EQW7 1749 aa14.75□□□□□ -0.05
Ebf3-202ENSMUST00000106118 FanciQ8K368 1330 aa14.75□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Arhgef28P97433 1693 aa14.74□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Esx1O88933 382 aa14.73□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Zc3h13E9Q784 1729 aaKnown RBP14.73□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Nolc1E9Q5C9 702 aaKnown RBP14.73□□□□□ -0.05
Ebf3-202ENSMUST00000106118 KdrP35918 1367 aa14.73□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Zfp444Q3TDV8 331 aaKnown RBP14.73□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Itsn1Q9Z0R4 1714 aa14.72□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Ercc6l2Q9JIM3 1537 aa14.72□□□□□ -0.05
Ebf3-202ENSMUST00000106118 Med14A2ABV5 1459 aaKnown RBP14.7□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Cdk19Q8BWD8 501 aa14.7□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Golga2Q921M4 999 aa14.69□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Cald1E9QA15 768 aaKnown RBP14.68□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Kank1E9Q238 1360 aa14.68□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Dip2aQ8BWT5 1523 aa14.68□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Gemin5Q8BX17 1502 aaKnown RBP14.67□□□□□ -0.06
Ebf3-202ENSMUST00000106118 PplQ9R269 1755 aa14.67□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Supt16hQ920B9 1047 aa14.67□□□□□ -0.06
Ebf3-202ENSMUST00000106118 GsdmaQ9EST1 446 aa14.67□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Kif16bB1AVY7 1312 aa14.66□□□□□ -0.06
Ebf3-202ENSMUST00000106118 CrbnQ8C7D2 445 aa14.66□□□□□ -0.06
Ebf3-202ENSMUST00000106118 L3mbtl2P59178 703 aa14.66□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Cep170bQ80U49 1574 aa14.65□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Speer4f1Q9D5Q6 258 aa14.65□□□□□ -0.06
Ebf3-202ENSMUST00000106118 Scaf11E9PZM7 1456 aaKnown RBP14.64□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Adamtsl3G3UXC7 1706 aa14.64□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Ralbp1Q62172 648 aa14.63□□□□□ -0.07
Ebf3-202ENSMUST00000106118 IbtkQ6ZPR6 1352 aaKnown RBP14.63□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Nrxn1Q9CS84 1514 aa14.62□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Map4k4P97820 1233 aaKnown RBP14.62□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Dnajc5gQ8C632 165 aa14.62□□□□□ -0.07
Ebf3-202ENSMUST00000106118 PzpQ61838 1495 aa14.62□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Mbd3Q9Z2D8 285 aaKnown RBP14.6□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Asxl2Q8BZ32 1370 aa14.6□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Adgrl1Q80TR1 1466 aa14.6□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Plekhh1Q80TI1 1356 aa14.59□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Pik3r4Q8VD65 1358 aa14.59□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Chd2E9PZM4 1827 aaKnown RBP14.59□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Tsen2Q6P7W5 460 aa14.59□□□□□ -0.07
Ebf3-202ENSMUST00000106118 U2af1Q9D883 239 aaKnown RBP14.59□□□□□ -0.07
Ebf3-202ENSMUST00000106118 Abca14E9Q8F8 1683 aa14.58□□□□□ -0.08
Ebf3-202ENSMUST00000106118 NinlQ6ZQ12 1394 aa14.58□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Neurod2Q62414 383 aa14.58□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Hsp90aa1P07901 733 aaKnown RBP14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 MyclP10166 368 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Idi2Q8BFZ6 227 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 GphnQ8BUV3 769 aaKnown RBP14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Rwdd1Q9CQK7 243 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Zranb1Q7M760 708 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Ccdc30Q8BVF4 654 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Kiaa1107Q80TK0 1369 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Ttc41Q692V3 1318 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Uspl1Q3ULM6 1089 aa14.57□□□□□ -0.08
Ebf3-202ENSMUST00000106118 HnrnpmQ9D0E1 729 aaKnown RBP14.56□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Mapk8ip3Q9ESN9 1337 aa14.55□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Slit3Q9WVB4 1523 aa14.55□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Ciz1Q8VEH2 845 aa14.55□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Usp19Q3UJD6 1360 aa14.55□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Map3k19E9Q3S4 1311 aa14.55□□□□□ -0.08
Ebf3-202ENSMUST00000106118 NktrP30415 1453 aa14.54□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Nwd1A6H603 1563 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 CatipB9EKE5 520 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Znf316Q6PGE4 1016 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Ncbp3Q8BZR9 615 aaKnown RBP14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Sirt1Q923E4 737 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Ccdc27Q3V036 639 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Cps1Q8C196 1500 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Erbb3Q61526 1339 aa14.53□□□□□ -0.08
Ebf3-202ENSMUST00000106118 Q3UJC8 639 aa14.52□□□□□ -0.09
Ebf3-202ENSMUST00000106118 PtpruB1AUH1 1446 aa14.5□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Bcl9Q9D219 1425 aa14.49□□□□□ -0.09
Ebf3-202ENSMUST00000106118 Birc3O08863 600 aa14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms