RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 RictorQ6QI06 1708 aa16.24■□□□□ 0.19
Actb-201ENSMUST00000100497 Nlrp6Q91WS2 869 aa16.23■□□□□ 0.19
Actb-201ENSMUST00000100497 Mbd3Q9Z2D8 285 aaKnown RBP16.23■□□□□ 0.19
Actb-201ENSMUST00000100497 Plekhg1F6S200 1446 aa16.23■□□□□ 0.19
Actb-201ENSMUST00000100497 Safb2Q80YR5 991 aaKnown RBP16.23■□□□□ 0.19
Actb-201ENSMUST00000100497 CltcQ68FD5 1675 aaKnown RBP16.22■□□□□ 0.19
Actb-201ENSMUST00000100497 Zfp444Q3TDV8 331 aaKnown RBP16.22■□□□□ 0.19
Actb-201ENSMUST00000100497 Afap1Q80YS6 731 aa16.22■□□□□ 0.19
Actb-201ENSMUST00000100497 Dcaf11Q91VU6 549 aa16.21■□□□□ 0.19
Actb-201ENSMUST00000100497 NeflP08551 543 aa16.2■□□□□ 0.18
Actb-201ENSMUST00000100497 Arhgef28P97433 1693 aa16.2■□□□□ 0.18
Actb-201ENSMUST00000100497 Kif13aQ9EQW7 1749 aa16.19■□□□□ 0.18
Actb-201ENSMUST00000100497 L3mbtl2P59178 703 aa16.19■□□□□ 0.18
Actb-201ENSMUST00000100497 MlecQ6ZQI3 291 aaKnown RBP16.19■□□□□ 0.18
Actb-201ENSMUST00000100497 Itsn1Q9Z0R4 1714 aa16.18■□□□□ 0.18
Actb-201ENSMUST00000100497 Rtl5Q5DTT4 599 aa16.17■□□□□ 0.18
Actb-201ENSMUST00000100497 Ncbp3Q8BZR9 615 aaKnown RBP16.16■□□□□ 0.18
Actb-201ENSMUST00000100497 PtprmP28828 1452 aa16.16■□□□□ 0.18
Actb-201ENSMUST00000100497 P3h3Q8CG70 732 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Nrxn1Q9CS84 1514 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 PplQ9R269 1755 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Kif16bB1AVY7 1312 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Naip7Q9JIB3 1402 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Gm38655A0A286YDK6 273 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Plekhh1Q80TI1 1356 aa16.15■□□□□ 0.18
Actb-201ENSMUST00000100497 Esx1O88933 382 aa16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 Map4k4P97820 1233 aaKnown RBP16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 Ralbp1Q62172 648 aa16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 TnikP83510 1323 aa16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 Ppp4r2Q0VGB7 417 aa16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 Gemin5Q8BX17 1502 aaKnown RBP16.13■□□□□ 0.17
Actb-201ENSMUST00000100497 FanciQ8K368 1330 aa16.12■□□□□ 0.17
Actb-201ENSMUST00000100497 Med14A2ABV5 1459 aaKnown RBP16.12■□□□□ 0.17
Actb-201ENSMUST00000100497 Shq1Q7TMX5 569 aa16.12■□□□□ 0.17
Actb-201ENSMUST00000100497 Exosc9Q9JHI7 438 aaKnown RBP16.12■□□□□ 0.17
Actb-201ENSMUST00000100497 Dip2aQ8BWT5 1523 aa16.12■□□□□ 0.17
Actb-201ENSMUST00000100497 Golga2Q921M4 999 aa16.11■□□□□ 0.17
Actb-201ENSMUST00000100497 Atp1b4Q99ME6 356 aa16.11■□□□□ 0.17
Actb-201ENSMUST00000100497 Prkrip1Q9CWV6 186 aaKnown RBP16.1■□□□□ 0.17
Actb-201ENSMUST00000100497 Scaf11E9PZM7 1456 aaKnown RBP16.1■□□□□ 0.17
Actb-201ENSMUST00000100497 Cald1E9QA15 768 aaKnown RBP16.09■□□□□ 0.17
Actb-201ENSMUST00000100497 Gsto1O09131 240 aa16.09■□□□□ 0.17
Actb-201ENSMUST00000100497 Adgrl1Q80TR1 1466 aa16.09■□□□□ 0.17
Actb-201ENSMUST00000100497 Dip2bQ3UH60 1574 aa16.09■□□□□ 0.17
Actb-201ENSMUST00000100497 IbtkQ6ZPR6 1352 aaKnown RBP16.09■□□□□ 0.17
Actb-201ENSMUST00000100497 Ciz1Q8VEH2 845 aa16.08■□□□□ 0.16
Actb-201ENSMUST00000100497 AampJ3QN89 436 aa16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 Rad21Q61550 635 aaKnown RBP16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 Rwdd1Q9CQK7 243 aa16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 Tcerg1Q8CGF7 1100 aaKnown RBP16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 GsdmaQ9EST1 446 aa16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 Erbb3Q61526 1339 aa16.07■□□□□ 0.16
Actb-201ENSMUST00000100497 Usp19Q3UJD6 1360 aa16.06■□□□□ 0.16
Actb-201ENSMUST00000100497 MyclP10166 368 aa16.06■□□□□ 0.16
Actb-201ENSMUST00000100497 Zmym3Q9JLM4 1370 aa16.05■□□□□ 0.16
Actb-201ENSMUST00000100497 Uspl1Q3ULM6 1089 aa16.05■□□□□ 0.16
Actb-201ENSMUST00000100497 Utp14aQ640M1 767 aaKnown RBP16.05■□□□□ 0.16
Actb-201ENSMUST00000100497 Abca14E9Q8F8 1683 aa16.05■□□□□ 0.16
Actb-201ENSMUST00000100497 Brwd3A2AHJ4 1799 aa16.05■□□□□ 0.16
Actb-201ENSMUST00000100497 Nolc1E9Q5C9 702 aaKnown RBP16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Cnga1P29974 684 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 CrbnQ8C7D2 445 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Speer4f1Q9D5Q6 258 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Bcl9Q9D219 1425 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Kiaa1107Q80TK0 1369 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Stk26Q99JT2 416 aa16.04■□□□□ 0.16
Actb-201ENSMUST00000100497 Chd2E9PZM4 1827 aaKnown RBP16.03■□□□□ 0.16
Actb-201ENSMUST00000100497 Fam71e1A1L3C1 212 aa16.02■□□□□ 0.16
Actb-201ENSMUST00000100497 Cep170bQ80U49 1574 aa16.02■□□□□ 0.15
Actb-201ENSMUST00000100497 Ccdc30Q8BVF4 654 aa16.02■□□□□ 0.15
Actb-201ENSMUST00000100497 Atp2b2Q9R0K7 1198 aa16.02■□□□□ 0.15
Actb-201ENSMUST00000100497 Znf541Q0GGX2 1363 aa16.01■□□□□ 0.15
Actb-201ENSMUST00000100497 Nwd1A6H603 1563 aa16.01■□□□□ 0.15
Actb-201ENSMUST00000100497 4930407I10RikD3Z5T8 1512 aa16.01■□□□□ 0.15
Actb-201ENSMUST00000100497 Q9D9H8 365 aa16.01■□□□□ 0.15
Actb-201ENSMUST00000100497 Ercc6l2Q9JIM3 1537 aa15.99■□□□□ 0.15
Actb-201ENSMUST00000100497 NktrP30415 1453 aa15.99■□□□□ 0.15
Actb-201ENSMUST00000100497 Iqsec2Q5DU25 1478 aa15.99■□□□□ 0.15
Actb-201ENSMUST00000100497 Supt16hQ920B9 1047 aa15.99■□□□□ 0.15
Actb-201ENSMUST00000100497 Cdk19Q8BWD8 501 aa15.98■□□□□ 0.15
Actb-201ENSMUST00000100497 Cps1Q8C196 1500 aa15.98■□□□□ 0.15
Actb-201ENSMUST00000100497 Usp32F8VPZ3 1604 aa15.97■□□□□ 0.15
Actb-201ENSMUST00000100497 Pik3r4Q8VD65 1358 aa15.97■□□□□ 0.15
Actb-201ENSMUST00000100497 Lmtk3Q5XJV6 1424 aa15.97■□□□□ 0.15
Actb-201ENSMUST00000100497 Psme1P97371 249 aa15.96■□□□□ 0.15
Actb-201ENSMUST00000100497 Topaz1E5FYH1 1653 aa15.96■□□□□ 0.15
Actb-201ENSMUST00000100497 Kif1aP33173 1695 aa15.96■□□□□ 0.15
Actb-201ENSMUST00000100497 Rims2Q9EQZ7 1530 aa15.95■□□□□ 0.14
Actb-201ENSMUST00000100497 Slit3Q9WVB4 1523 aa15.95■□□□□ 0.14
Actb-201ENSMUST00000100497 Tnrc6bQ8BKI2 1810 aaKnown RBP15.95■□□□□ 0.14
Actb-201ENSMUST00000100497 Tsen2Q6P7W5 460 aa15.94■□□□□ 0.14
Actb-201ENSMUST00000100497 Arap3Q8R5G7 1538 aa15.93■□□□□ 0.14
Actb-201ENSMUST00000100497 Txndc2Q6P902 515 aa15.93■□□□□ 0.14
Actb-201ENSMUST00000100497 Sirt1Q923E4 737 aa15.93■□□□□ 0.14
Actb-201ENSMUST00000100497 PzpQ61838 1495 aa15.93■□□□□ 0.14
Actb-201ENSMUST00000100497 Fchsd2Q3USJ8 740 aa15.92■□□□□ 0.14
Actb-201ENSMUST00000100497 PaskQ8CEE6 1383 aa15.92■□□□□ 0.14
Actb-201ENSMUST00000100497 PtpruB1AUH1 1446 aa15.91■□□□□ 0.14
Actb-201ENSMUST00000100497 Zfp777B9EKF4 885 aa15.91■□□□□ 0.14
Actb-201ENSMUST00000100497 Hoxb7P09024 217 aa15.91■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms