RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Rapgef4Q9EQZ6 1011 aa12.52□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Stard3nlQ9DCI3 235 aa12.52□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gnai1B2RSH2 354 aa12.52□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gnai3Q9DC51 354 aa12.52□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Pde4bB1AWC9 736 aa12.52□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Trim34aQ99PP6 485 aa12.52□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Arhgap5P97393 1501 aa12.52□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Sv2bQ8BG39 683 aa12.52□□□□□ -0.41
Scn9a-201ENSMUST00000100063 FosbP13346 338 aa12.51□□□□□ -0.41
Scn9a-201ENSMUST00000100063 TbcaP48428 108 aaKnown RBP12.51□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Speer4bQ9D9F7 267 aa12.51□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Utp3Q9JI13 469 aaKnown RBP12.51□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Usp47Q8BY87 1376 aa12.51□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Fam184bQ0KK56 942 aa12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Pdcl3Q8BVF2 240 aa12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Eif3aP23116 1344 aaKnown RBP12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Ric3Q8BPM6 367 aa12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 LrpprcQ6PB66 1392 aaKnown RBP12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Sin3aQ60520 1274 aaKnown RBP12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 HypkQ9CR41 129 aa12.5□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Psma5Q9Z2U1 241 aaKnown RBP12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Odf2lQ9D478 642 aa12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Smc3Q9CW03 1217 aaKnown RBP12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Cchcr1Q8K2I2 770 aa12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Hnrnpul1Q8VDM6 859 aaKnown RBP12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Cux1P53564 1515 aa12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Casq1O09165 405 aa12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 VgfQ0VGU4 617 aa12.49□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Rrp12Q6P5B0 1295 aaKnown RBP12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Slc5a4bQ91ZP4 660 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Atp2b2Q9R0K7 1198 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Kif3cO35066 796 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Hmox1P14901 289 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Smarca4Q3TKT4 1613 aaKnown RBP12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Chaf1aQ9QWF0 911 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Gm21680A0A0G2JGR8 267 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Washc2Q6PGL7 1334 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 SlkO54988 1233 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 TkfcQ8VC30 578 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Erc1Q99MI1 1120 aa12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Dhx29Q6PGC1 1365 aaKnown RBP12.48□□□□□ -0.41
Scn9a-201ENSMUST00000100063 CftrP26361 1476 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Hmgn5Q9JL35 406 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Jph4Q80WT0 628 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 A0A0U1RNP2 1173 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Irx3P81067 507 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Skap1Q3UUV5 355 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Q9D9H8 365 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Polr3gQ6NXY9 223 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Phactr2B1AVP0 632 aa12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Noc2lQ9WV70 747 aaKnown RBP12.47□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Inpp5dQ9ES52 1191 aa12.46□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Ralbp1Q62172 648 aa12.46□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Rad54l2Q99NG0 1466 aa12.46□□□□□ -0.41
Scn9a-201ENSMUST00000100063 Gm21663A0A0G2JE01 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Gm7361D3Z6R1 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 5031410I06RikE9Q4E0 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Gm1979E9QAN3 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Gm5862K7N5V5 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Gm10220K7N660 267 aa12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Atad2bE9Q166 1460 aaKnown RBP12.46□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Dctn1O08788 1281 aa12.45□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Cttnbp2B9EJA2 1648 aa12.45□□□□□ -0.42
Scn9a-201ENSMUST00000100063 PsapQ61207 557 aaKnown RBP12.45□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Flad1Q8R123 492 aa12.44□□□□□ -0.42
Scn9a-201ENSMUST00000100063 GphnQ8BUV3 769 aaKnown RBP12.44□□□□□ -0.42
Scn9a-201ENSMUST00000100063 4930572O03RikQ8C5Y0 211 aa12.44□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ddrgk1Q80WW9 315 aa12.44□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Vps37dQ810I0 261 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Chmp4cQ9D7F7 232 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Swt1Q9DBQ9 907 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ubxn4Q8VCH8 506 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Q9D2X8 372 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Tdrd9Q14BI7 1383 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Cep131Q62036 1060 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Dusp9Q7TNL7 452 aa12.43□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Pip4k2aO70172 405 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Sycp2Q9CUU3 1500 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Bicdl1A0JNT9 577 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 ApobrQ8VBT6 942 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Stim1P70302 685 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Erich4Q3UNU4 136 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 NgdnQ9DB96 315 aaKnown RBP12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Luc7lQ9CYI4 371 aaKnown RBP12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Dennd6aQ8BH65 605 aa12.42□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Taok2Q6ZQ29 1240 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ipo9Q91YE6 1041 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Nol7Q9D7Z3 254 aaKnown RBP12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Ush1cQ9ES64 910 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 AampJ3QN89 436 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Kcnj4P52189 445 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Elp1Q7TT37 1333 aaKnown RBP12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Plcd4Q8K3R3 807 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Lrrfip2Q91WK0 415 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Kif4P33174 1231 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 4933402E13RikQ9D4D2 429 aa12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Mad1l1Q9WTX8 717 aaKnown RBP12.41□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Anp32eP97822 260 aaKnown RBP12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Kiaa0753Q6A000 959 aa12.4□□□□□ -0.42
Scn9a-201ENSMUST00000100063 Erlin2Q8BFZ9 340 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms