RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Znf704Q9ERQ3 566 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Fkbp4P30416 458 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm21663A0A0G2JE01 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm21680A0A0G2JGR8 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm7361D3Z6R1 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 5031410I06RikE9Q4E0 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm1979E9QAN3 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm5862K7N5V5 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Gm10220K7N660 267 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Agtpbp1Q641K1 1218 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Lrrcc1Q69ZB0 1026 aa18.4■□□□□ 0.54
Ccdc50-203ENSMUST00000100026 Iqgap2Q3UQ44 1575 aa18.39■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Gimap6Q8K349 305 aa18.39■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Stk3Q9JI10 497 aa18.38■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 AcrbpQ3V140 540 aa18.38■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Rbm28Q8CGC6 750 aaKnown RBP18.38■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Q9D2X8 372 aa18.38■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Rad54l2Q99NG0 1466 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Utp3Q9JI13 469 aaKnown RBP18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Rfx1P48377 963 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Kcnh8P59111 1102 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Egfem1Q8C088 590 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Smc3Q9CW03 1217 aaKnown RBP18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Washc4Q3UMB9 1173 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Cux1P53564 1515 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Prl7d1P04769 244 aa18.37■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Polr1aO35134 1717 aaKnown RBP18.36■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 ChgaP26339 463 aaKnown RBP18.36■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Irx3P81067 507 aa18.36■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Map7d2A2AG50 781 aa18.36■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Hnrnpul1Q8VDM6 859 aaKnown RBP18.35■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Trim58Q5NCC9 485 aa18.35■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Stard3nlQ9DCI3 235 aa18.34■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Ehmt1Q5DW34 1296 aa18.34■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Smg6P61406 1418 aaKnown RBP18.34■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 Crybg2B7ZCC2 1516 aa18.33■□□□□ 0.53
Ccdc50-203ENSMUST00000100026 GphnQ8BUV3 769 aaKnown RBP18.33■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Sycp1Q62209 993 aa18.33■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Gpatch3Q8BIY1 525 aa18.32■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cetn4Q8K4K1 168 aa18.32■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Rapgef4Q9EQZ6 1011 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Mad1l1Q9WTX8 717 aaKnown RBP18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Sel1lQ9Z2G6 790 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 TkfcQ8VC30 578 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Trim34aQ99PP6 485 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cyp46a1Q9WVK8 500 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Bicdl1A0JNT9 577 aa18.31■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cdk19Q8BWD8 501 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Wdhd1P59328 1117 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Commd10Q8JZY2 202 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cfap99A0A140LIX9 648 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Pde4bB1AWC9 736 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Ccdc30Q8BVF4 654 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 ApobrQ8VBT6 942 aa18.3■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Trim34bJ3QNR8 485 aa18.29■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 ZgpatQ8VDM1 511 aa18.29■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Odf2lQ9D478 642 aa18.29■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Zeb2Q9R0G7 1215 aa18.29■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Fgd6Q69ZL1 1399 aa18.29■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Arhgap31A6X8Z5 1425 aa18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 4930572O03RikQ8C5Y0 211 aa18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Ttc19Q8CC21 365 aa18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cd109Q8R422 1442 aa18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Plagl1Q9JLQ4 704 aa18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Rrp12Q6P5B0 1295 aaKnown RBP18.28■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 HnrnpmQ9D0E1 729 aaKnown RBP18.27■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Cabp2Q9JLK4 216 aa18.27■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 VgfQ0VGU4 617 aa18.27■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Hs1bp3Q3TC93 395 aa18.27■□□□□ 0.52
Ccdc50-203ENSMUST00000100026 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.27■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Psma5Q9Z2U1 241 aaKnown RBP18.27■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 A0A0U1RNP2 1173 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Necab1Q8BG18 352 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 OptnQ8K3K8 584 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Slc5a4bQ91ZP4 660 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Nap1l1P28656 391 aaKnown RBP18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 TbcaP48428 108 aaKnown RBP18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Cep89Q9CZX2 791 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Glipr1l2Q9CQ35 332 aa18.26■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Usp48Q3V0C5 1052 aa18.25■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Pank1Q8K4K6 548 aa18.25■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Nol8Q3UHX0 1147 aaKnown RBP18.25■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 PsapQ61207 557 aaKnown RBP18.25■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Smarca2Q6DIC0 1577 aa18.25■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Ripply1Q2WG77 201 aa18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Rpgrip1lQ8CG73 1264 aa18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Gprasp1Q5U4C1 1347 aa18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Zfp644E9QA22 1323 aa18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 NgdnQ9DB96 315 aaKnown RBP18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Flad1Q8R123 492 aa18.24■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Cchcr1Q8K2I2 770 aa18.23■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Ncbp1Q3UYV9 790 aaKnown RBP18.23■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Strn4P58404 760 aa18.23■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Kif3aP28741 701 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Nol12Q8BG17 217 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Fam50bQ9WTJ8 334 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Ttc5Q99LG4 440 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Acsbg1Q99PU5 721 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Samd1D3YXK1 519 aa18.22■□□□□ 0.51
Ccdc50-203ENSMUST00000100026 Hap1O35668 628 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms