RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 G3bp1P97855 465 aaKnown RBP16.61■□□□□ 0.25
Casc4-202ENSMUST00000089912 Rbm10Q99KG3 930 aaKnown RBP16.61■□□□□ 0.25
Casc4-202ENSMUST00000089912 Rbm25B2RY56 838 aaKnown RBP16.6■□□□□ 0.25
Casc4-202ENSMUST00000089912 Tex14Q7M6U3 1450 aa16.6■□□□□ 0.25
Casc4-202ENSMUST00000089912 DmtnQ9WV69 405 aa16.6■□□□□ 0.25
Casc4-202ENSMUST00000089912 Dot1lQ6XZL8 1540 aa16.59■□□□□ 0.25
Casc4-202ENSMUST00000089912 Adamts12Q811B3 1600 aa16.59■□□□□ 0.25
Casc4-202ENSMUST00000089912 Tarbp1E9Q368 1579 aa16.59■□□□□ 0.25
Casc4-202ENSMUST00000089912 Kdm5cP41230 1554 aa16.59■□□□□ 0.25
Casc4-202ENSMUST00000089912 KnstrnQ9D9Z1 312 aaKnown RBP16.59■□□□□ 0.25
Casc4-202ENSMUST00000089912 Rrp9Q91WM3 475 aaKnown RBP16.58■□□□□ 0.24
Casc4-202ENSMUST00000089912 NgefQ8CHT1 710 aa16.58■□□□□ 0.24
Casc4-202ENSMUST00000089912 ErbinQ80TH2 1402 aa16.58■□□□□ 0.24
Casc4-202ENSMUST00000089912 Kif21bQ9QXL1 1668 aa16.57■□□□□ 0.24
Casc4-202ENSMUST00000089912 Mlh3A0A1Y7VMP7 1443 aa16.57■□□□□ 0.24
Casc4-202ENSMUST00000089912 Gm16486A0A1D5RMD1 1434 aa16.56■□□□□ 0.24
Casc4-202ENSMUST00000089912 Phf14Q9D4H9 881 aa16.56■□□□□ 0.24
Casc4-202ENSMUST00000089912 P2rx7Q9Z1M0 595 aa16.56■□□□□ 0.24
Casc4-202ENSMUST00000089912 Terf2O35144 541 aa16.56■□□□□ 0.24
Casc4-202ENSMUST00000089912 Kiaa1107Q80TK0 1369 aa16.56■□□□□ 0.24
Casc4-202ENSMUST00000089912 Lemd3Q9WU40 921 aa16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 PtprgQ05909 1442 aa16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 Cald1E9QA15 768 aaKnown RBP16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 Triml2E9PW10 424 aa16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 Rnf214Q8BFU3 668 aaKnown RBP16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 Nol12Q8BG17 217 aa16.55■□□□□ 0.24
Casc4-202ENSMUST00000089912 Lrrc9Q8CDN9 1456 aa16.54■□□□□ 0.24
Casc4-202ENSMUST00000089912 Lamc1P02468 1607 aaKnown RBP16.53■□□□□ 0.24
Casc4-202ENSMUST00000089912 Tbc1d32Q3URV1 1296 aa16.53■□□□□ 0.24
Casc4-202ENSMUST00000089912 Rrp12Q6P5B0 1295 aaKnown RBP16.53■□□□□ 0.24
Casc4-202ENSMUST00000089912 Abca16E9PWJ7 1678 aa16.53■□□□□ 0.24
Casc4-202ENSMUST00000089912 Rsph3aQ3UFY4 516 aa16.52■□□□□ 0.23
Casc4-202ENSMUST00000089912 SkilQ60665 675 aa16.52■□□□□ 0.23
Casc4-202ENSMUST00000089912 Plch2A2AP18 1501 aa16.51■□□□□ 0.23
Casc4-202ENSMUST00000089912 Atl3Q91YH5 541 aa16.51■□□□□ 0.23
Casc4-202ENSMUST00000089912 Shq1Q7TMX5 569 aa16.5■□□□□ 0.23
Casc4-202ENSMUST00000089912 Nsd2Q8BVE8 1365 aa16.5■□□□□ 0.23
Casc4-202ENSMUST00000089912 CalcaP70160 136 aa16.5■□□□□ 0.23
Casc4-202ENSMUST00000089912 Cdc42bpaQ3UU96 1719 aa16.5■□□□□ 0.23
Casc4-202ENSMUST00000089912 Mapkbp1Q6NS57 1503 aa16.5■□□□□ 0.23
Casc4-202ENSMUST00000089912 Mcm10Q0VBD2 885 aa16.49■□□□□ 0.23
Casc4-202ENSMUST00000089912 Pdlim2Q8R1G6 349 aa16.49■□□□□ 0.23
Casc4-202ENSMUST00000089912 Smarca5Q91ZW3 1051 aaKnown RBP16.48■□□□□ 0.23
Casc4-202ENSMUST00000089912 Utp14aQ640M1 767 aaKnown RBP16.48■□□□□ 0.23
Casc4-202ENSMUST00000089912 Kiaa1551Q5DTW7 1521 aa16.48■□□□□ 0.23
Casc4-202ENSMUST00000089912 Caskin1Q6P9K8 1431 aa16.47■□□□□ 0.23
Casc4-202ENSMUST00000089912 Atf7ipQ7TT18 1306 aa16.47■□□□□ 0.23
Casc4-202ENSMUST00000089912 Ttc21bQ0HA38 1315 aa16.47■□□□□ 0.23
Casc4-202ENSMUST00000089912 Ubap1lG3UW59 384 aa16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 Tnnt1O88346 262 aa16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 Pdia4P08003 638 aaKnown RBP16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 DroshaQ5HZJ0 1373 aaKnown RBP16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 Klhdc4Q921I2 584 aa16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 PalmQ9Z0P4 383 aa16.46■□□□□ 0.23
Casc4-202ENSMUST00000089912 Edc4Q3UJB9 1406 aaKnown RBP16.46■□□□□ 0.22
Casc4-202ENSMUST00000089912 Mroh2aD3Z750 1679 aa16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 Prdm16A2A935 1275 aa16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 Usp16Q99LG0 825 aa16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 Hsp90b1P08113 802 aaKnown RBP16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 PogkQ80TC5 607 aa16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 Phlpp2Q8BXA7 1320 aa16.45■□□□□ 0.22
Casc4-202ENSMUST00000089912 Map4k4P97820 1233 aaKnown RBP16.44■□□□□ 0.22
Casc4-202ENSMUST00000089912 Antxr1Q9CZ52 562 aa16.44■□□□□ 0.22
Casc4-202ENSMUST00000089912 Q9D9H8 365 aa16.44■□□□□ 0.22
Casc4-202ENSMUST00000089912 Tbc1d9Q3UYK3 1264 aa16.44■□□□□ 0.22
Casc4-202ENSMUST00000089912 Gm14025A2AP89 1413 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Pcmtd1P59913 357 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Samd1D3YXK1 519 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Casq1O09165 405 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 CastP51125 788 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Q3UPC7 1272 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Chrna2Q91X60 512 aa16.43■□□□□ 0.22
Casc4-202ENSMUST00000089912 Phactr2B1AVP0 632 aa16.42■□□□□ 0.22
Casc4-202ENSMUST00000089912 Q9D2X8 372 aa16.42■□□□□ 0.22
Casc4-202ENSMUST00000089912 Cabp2Q9JLK4 216 aa16.42■□□□□ 0.22
Casc4-202ENSMUST00000089912 CenpjQ569L8 1344 aa16.42■□□□□ 0.22
Casc4-202ENSMUST00000089912 AI481877A2ALV5 1481 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Rbm27Q5SFM8 1060 aaKnown RBP16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Slc12a5Q91V14 1138 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Nup160Q9Z0W3 1402 aaKnown RBP16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Ric3Q8BPM6 367 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 4933402E13RikQ9D4D2 429 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Abcc2Q8VI47 1543 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Fancd2Q80V62 1450 aa16.41■□□□□ 0.22
Casc4-202ENSMUST00000089912 Cpa2Q504N0 417 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Sytl4Q9R0Q1 673 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Abcc6Q9R1S7 1498 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Gpatch11Q3UFS4 262 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Plekhm2Q80TQ5 1018 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Cavin4A2AMM0 362 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Sbno1Q689Z5 1390 aa16.4■□□□□ 0.22
Casc4-202ENSMUST00000089912 Stard8Q8K031 1019 aa16.39■□□□□ 0.21
Casc4-202ENSMUST00000089912 Bloc1s4Q8VED2 215 aa16.39■□□□□ 0.21
Casc4-202ENSMUST00000089912 Trpm2Q91YD4 1506 aa16.39■□□□□ 0.21
Casc4-202ENSMUST00000089912 Kif20aP97329 887 aa16.38■□□□□ 0.21
Casc4-202ENSMUST00000089912 Kif2cQ922S8 721 aa16.38■□□□□ 0.21
Casc4-202ENSMUST00000089912 Babam1Q3UI43 333 aa16.38■□□□□ 0.21
Casc4-202ENSMUST00000089912 CarsQ9ER72 831 aaKnown RBP16.38■□□□□ 0.21
Casc4-202ENSMUST00000089912 Atp2b2Q9R0K7 1198 aa16.38■□□□□ 0.21
Casc4-202ENSMUST00000089912 Tmc1Q8R4P5 757 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms