RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 1700010I14RikQ7TPG0 532 aa16.8■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Necab1Q8BG18 352 aa16.8■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Q8C5K5 320 aa16.8■□□□□ 0.28
Col3a1-201ENSMUST00000087883 SkilQ60665 675 aa16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Kif3cO35066 796 aa16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Nap1l1P28656 391 aaKnown RBP16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Swt1Q9DBQ9 907 aa16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Rsph4aQ8BYM7 716 aa16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 PdcQ9QW08 244 aa16.79■□□□□ 0.28
Col3a1-201ENSMUST00000087883 CrcpO35427 148 aa16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Chaf1aQ9QWF0 911 aa16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Fmnl2A2APV2 1086 aa16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Gtf2f1Q3THK3 508 aaKnown RBP16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Stk3Q9JI10 497 aa16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Psma5Q9Z2U1 241 aaKnown RBP16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Phf14Q9D4H9 881 aa16.78■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Chmp7Q8R1T1 451 aa16.77■□□□□ 0.28
Col3a1-201ENSMUST00000087883 Me1P06801 572 aa16.77■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Mcm2P97310 904 aa16.76■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Dctn1O08788 1281 aa16.76■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Cfdp1O88271 295 aaKnown RBP16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Olfml1Q8BSH2 233 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Gm21190A0A0G2JGJ6 266 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Tmco3Q8BH01 678 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 AnlnQ8K298 1121 aaKnown RBP16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Trim29Q8R2Q0 587 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Nop14Q8R3N1 860 aaKnown RBP16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Gtf2a1Q99PM3 378 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Babam1Q3UI43 333 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Sycp1Q62209 993 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Sv2bQ8BG39 683 aa16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Zkscan1Q8BGS3 561 aaKnown RBP16.75■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Def6Q8C2K1 630 aa16.74■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Ankrd36D3Z4K0 1415 aa16.74■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Fez1Q8K0X8 392 aa16.74■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Cux2P70298 1426 aa16.74■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Hdgfl1Q2VPR5 283 aa16.74■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Slc4a2P13808 1237 aaKnown RBP16.73■□□□□ 0.27
Col3a1-201ENSMUST00000087883 PnisrA2AJT4 805 aaKnown RBP16.73■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Zkscan2G3X952 960 aa16.73■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Q7TT23 1179 aa16.73■□□□□ 0.27
Col3a1-201ENSMUST00000087883 CalrP14211 416 aaKnown RBP16.72■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Atad2bE9Q166 1460 aaKnown RBP16.72■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Zfp444Q3TDV8 331 aaKnown RBP16.72■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Mrvi1Q9WUX5 899 aaKnown RBP16.72■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Fnbp4Q6ZQ03 1031 aa16.71■□□□□ 0.27
Col3a1-201ENSMUST00000087883 NefhP19246 1090 aa16.71■□□□□ 0.27
Col3a1-201ENSMUST00000087883 Ccdc171E9Q1U1 1324 aa16.7■□□□□ 0.26
Col3a1-201ENSMUST00000087883 MlecQ6ZQI3 291 aaKnown RBP16.7■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Paxip1Q6NZQ4 1056 aa16.7■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Hap1O35668 628 aa16.69■□□□□ 0.26
Col3a1-201ENSMUST00000087883 NexnQ7TPW1 607 aa16.69■□□□□ 0.26
Col3a1-201ENSMUST00000087883 ErbinQ80TH2 1402 aa16.69■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Ssh1Q76I79 1042 aa16.68■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Mphosph10Q810V0 681 aaKnown RBP16.68■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Bcl2l13P59017 434 aa16.68■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Gsdma3Q5Y4Y6 464 aa16.68■□□□□ 0.26
Col3a1-201ENSMUST00000087883 BcanQ61361 883 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Cep112Q5PR68 954 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 SelenooQ9DBC0 667 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Gsto1O09131 240 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 CastP51125 788 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Ppp2r1aQ76MZ3 589 aa16.67■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Stk38Q91VJ4 465 aa16.66■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Q9D9S1 216 aa16.66■□□□□ 0.26
Col3a1-201ENSMUST00000087883 TnmdQ9EP64 317 aa16.66■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Frmd3Q8BHD4 595 aa16.66■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Znf704Q9ERQ3 566 aa16.66■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Dhx29Q6PGC1 1365 aaKnown RBP16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Sptbn5F6UCX4 1208 aa16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Smc2Q8CG48 1191 aaKnown RBP16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Tmc1Q8R4P5 757 aa16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Rbm28Q8CGC6 750 aaKnown RBP16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Cc2d2bA0A286YDU8 1405 aa16.65■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Kcnh8P59111 1102 aa16.64■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Cog6Q8R3I3 657 aa16.64■□□□□ 0.26
Col3a1-201ENSMUST00000087883 Ccdc102aQ3TMW1 549 aa16.64■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Bag1Q60739 355 aa16.64■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Paf1Q8K2T8 535 aa16.64■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Ttll5Q8CHB8 1328 aa16.63■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Cnnm3Q32NY4 713 aa16.63■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Ccar2Q8VDP4 922 aaKnown RBP16.63■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Gps2Q921N8 327 aa16.63■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Washc2Q6PGL7 1334 aa16.63■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Trim55G3X8Y1 545 aa16.62■□□□□ 0.25
Col3a1-201ENSMUST00000087883 UvssaQ9D479 717 aa16.62■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Abl1P00520 1123 aa16.62■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Commd10Q8JZY2 202 aa16.62■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Dhx8A2A4P0 1244 aaKnown RBP16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Odf2lQ9D478 642 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Gcc1Q9D4H2 778 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 WrnO09053 1401 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Rab3gap2Q8BMG7 1366 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Fyb1O35601 819 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 ItpripQ3TNL8 555 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Nphp1Q9QY53 687 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Tdrd9Q14BI7 1383 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Mctp1E9PV86 951 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Kiaa0753Q6A000 959 aa16.61■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Trim30cD3YVI9 513 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms