RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Ppp1r9bQ6R891 817 aaKnown RBP19.64■□□□□ 0.74
Col17a1-202ENSMUST00000086923 Dhx8A2A4P0 1244 aaKnown RBP19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Triml2E9PW10 424 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Tsen2Q6P7W5 460 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ccdc181Q80ZU5 509 aa19.64■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Pibf1E9Q6K3 756 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Serpinb6bO08804 377 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Paxbp1P58501 919 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Usp47Q8BY87 1376 aa19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Nat10Q8K224 1024 aaKnown RBP19.63■□□□□ 0.73
Col17a1-202ENSMUST00000086923 ImpactO55091 318 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 TnmdQ9EP64 317 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ints3Q7TPD0 1041 aaKnown RBP19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Pmfbp1Q9WVQ0 1022 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Kiaa0753Q6A000 959 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Chmp3Q9CQ10 224 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cabp1Q9JLK7 227 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cfap58B2RW38 873 aa19.62■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Lekr1B2RVN1 116 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gm21969J3QJZ1 289 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Slc4a10Q5DTL9 1118 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Exoc8Q6PGF7 716 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Ctr9Q62018 1173 aaKnown RBP19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cc2d1aQ8K1A6 943 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Fbxo3Q9DC63 480 aa19.61■□□□□ 0.73
Col17a1-202ENSMUST00000086923 FosbP13346 338 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Utp14aQ640M1 767 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Brd2Q7JJ13 798 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gbp4Q61107 620 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 HmmrQ00547 794 aaKnown RBP19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Dnaaf4Q8R368 420 aa19.6■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Gprasp1Q5U4C1 1347 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cchcr1Q8K2I2 770 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Kif27Q7M6Z4 1394 aa19.59■□□□□ 0.73
Col17a1-202ENSMUST00000086923 AnlnQ8K298 1121 aaKnown RBP19.58■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Cplx1P63040 134 aa19.58■□□□□ 0.73
Col17a1-202ENSMUST00000086923 Clcn1Q64347 994 aa19.58■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Med4Q9CQA5 270 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cog6Q8R3I3 657 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 L3mbtl2P59178 703 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 NgefQ8CHT1 710 aa19.57■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Trim25Q61510 634 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 NexnQ7TPW1 607 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ppm1eQ80TL0 749 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Smc1bQ920F6 1248 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 GsdmaQ9EST1 446 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Birc3O08863 600 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Samm50Q8BGH2 469 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ccdc47Q9D024 483 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Mctp1E9PV86 951 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Spag9Q58A65 1321 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nap1l1P28656 391 aaKnown RBP19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Rassf4Q8CB96 322 aa19.56■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Kif2aP28740 705 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Uri1Q3TLD5 531 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Rpap1Q80TE0 1409 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Tmx4Q8C0L0 335 aa19.55■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Hmox1P14901 289 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 CenphQ9QYM8 241 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Pds5bQ4VA53 1446 aaKnown RBP19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Zscan10Q3URR7 782 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 ClasrpQ8CFC7 668 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Jakmip2D3YXK0 820 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Dync1i1O88485 628 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nf2P46662 596 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cplx2P84086 134 aa19.54■□□□□ 0.72
Col17a1-202ENSMUST00000086923 4931400O07RikQ9D4M5 137 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Cnnm3Q32NY4 713 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Nectin2P32507 530 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Mnat1P51949 309 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Kif18aQ91WD7 886 aa19.53■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Slu7Q8BHJ9 585 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Iqca1Q9CUL5 857 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Evc2Q8K1G2 1220 aa19.52■□□□□ 0.72
Col17a1-202ENSMUST00000086923 Ddx11Q6AXC6 880 aa19.52■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Adcy5P84309 1262 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Necab1Q8BG18 352 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Lamb3Q61087 1168 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Tceal9Q9DD24 104 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Q7TT23 1179 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Dnai2A2AC93 623 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nutm1Q8BHP2 1126 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Maats1Q8BRC6 783 aa19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Tfip11Q9ERA6 838 aaKnown RBP19.51■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Mcm2P97310 904 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Krt82Q99M74 516 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Dapk1Q80YE7 1442 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Gm45140A0A0N4SUM8 220 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Atp2b2Q9R0K7 1198 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Hap1O35668 628 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Cyp46a1Q9WVK8 500 aa19.5■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nucb2P81117 420 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Pde1cQ64338 706 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Ankrd24Q80VM7 985 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Nup88Q8CEC0 753 aaKnown RBP19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Ccdc39Q9D5Y1 937 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Zfp251Q6PCX8 632 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 CenpjQ569L8 1344 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Phldb2Q8K1N2 1249 aa19.49■□□□□ 0.71
Col17a1-202ENSMUST00000086923 Grpel1Q99LP6 217 aa19.48■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 66.4 ms