RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rbm42Q91V81 474 aaKnown RBP12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 AatfQ9JKX4 526 aaKnown RBP12□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Gm10093D3YYI8 482 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Hdac1O09106 482 aaKnown RBP11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Mmp14P53690 582 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Sass6Q80UK7 654 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Bag4Q8CI61 457 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Atl3Q91YH5 541 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Urb2E9Q7L1 1524 aaKnown RBP11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Card11Q8CIS0 1159 aa11.99□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 CrbnQ8C7D2 445 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Map3k4O08648 1597 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 SphkapQ6NSW3 1687 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 GscQ02591 256 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 CtifQ6PEE2 600 aaKnown RBP11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Kif15Q6P9L6 1387 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Setd1aE9PYH6 1716 aa11.98□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Anapc15-psA0A140T8L6 141 aa11.97□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Cavin1O54724 392 aa11.97□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Ess2O70279 479 aa11.97□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Kdm4cQ8VCD7 1054 aa11.97□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Duxf3A0A0N4SV92 674 aa11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Ccdc173A0JLY1 547 aa11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Rfx1P48377 963 aa11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Ccdc38Q8CDN8 563 aa11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Adam1bQ8R534 806 aa11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Ssr1Q9CY50 286 aaKnown RBP11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Kif14L0N7N1 1674 aaKnown RBP11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 PtmsQ9D0J8 101 aaKnown RBP11.96□□□□□ -0.49
Hmgb1-201ENSMUST00000085546 Kdm5cP41230 1554 aa11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ddx41Q91VN6 622 aaKnown RBP11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Polr1aO35134 1717 aaKnown RBP11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Cux2P70298 1426 aa11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Phf20l1Q8CCJ9 1013 aa11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Bloc1s4Q8VED2 215 aa11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ift140E9PY46 1464 aa11.95□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 DroshaQ5HZJ0 1373 aaKnown RBP11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Carmil1Q6EDY6 1374 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Zfp597E9Q6S0 419 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Psen1P49769 467 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ulbp1Q8HWA3 334 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Vsig10D3YX43 558 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 MycnP03966 462 aaKnown RBP11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Kiaa0754Q69ZZ9 979 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Fam135bQ9DAI6 1403 aa11.94□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Grin2bQ01097 1482 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Morc2aQ69ZX6 1030 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Chic2Q9D9G3 165 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Bach2P97303 839 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Erich4Q3UNU4 136 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Fam177a1Q8BR63 207 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Atf7ipQ7TT18 1306 aa11.93□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Trim30aP15533 496 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Lrriq3Q14DL3 633 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ice2Q3UZ18 988 aaKnown RBP11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Trim58Q5NCC9 485 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Gm11983V9GXS8 105 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Cdk13Q69ZA1 1511 aaKnown RBP11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Rrbp1Q99PL5 1605 aaKnown RBP11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Prr29B1ARI9 187 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Hvcn1Q3U2S8 269 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Pcdhgc5Q91XW9 944 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Gm9992B2RWK3 458 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Kif2aP28740 705 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Unc93aQ710D3 458 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Zkscan5Q9Z1D8 819 aa11.92□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ccdc34Q3UI66 367 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Arglu1Q3UL36 271 aaKnown RBP11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Kcna4Q61423 654 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Ccdc30Q8BVF4 654 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 E4f1Q8CCE9 783 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Cc2d1aQ8K1A6 943 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 4930548H24RikQ9D496 437 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Nxf2Q4ZGD8 691 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Pank1Q8K4K6 548 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Serpina10Q8R121 448 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Chaf1aQ9QWF0 911 aa11.91□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Pnmal2G3X9N3 661 aa11.9□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Casq1O09165 405 aa11.9□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Tmx4Q8C0L0 335 aa11.9□□□□□ -0.5
Hmgb1-201ENSMUST00000085546 Mdc1Q5PSV9 1707 aa11.89□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Hs1bp3Q3TC93 395 aa11.89□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rbm27Q5SFM8 1060 aaKnown RBP11.89□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Gm973E9Q295 1059 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 RbsnQ80Y56 783 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Ttc21aQ8C0S4 1314 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Syce3B5KM66 88 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rasa1E9PYG6 1038 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 MlecQ6ZQI3 291 aaKnown RBP11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Iqca1Q9CUL5 857 aa11.88□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 EzrP26040 586 aaKnown RBP11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rangap1P46061 589 aaKnown RBP11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Ctr9Q62018 1173 aaKnown RBP11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Chd1lQ9CXF7 900 aa11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Taf3Q5HZG4 932 aa11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Irx5Q9JKQ4 484 aa11.87□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Usp19Q3UJD6 1360 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Irx2P81066 474 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Nucb2P81117 420 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Znf771Q8BJ90 317 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms