RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Cdk5rap2Q8K389 1822 aa14.98□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Cnga1P29974 684 aa14.98□□□□□ -0.01
Ddx55-201ENSMUST00000071057 L3mbtl2P59178 703 aa14.98□□□□□ -0.01
Ddx55-201ENSMUST00000071057 AU022751B1B0V2 589 aa14.97□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Mak16Q8BGS0 296 aaKnown RBP14.97□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Gtf3c6Q9D8P7 227 aa14.97□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Itsn2Q9Z0R6 1659 aa14.97□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Prdm2A2A7B5 1709 aaKnown RBP14.97□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Efcab6Q6P1E8 1516 aa14.96□□□□□ -0.01
Ddx55-201ENSMUST00000071057 Nphp4P59240 1425 aa14.96□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Ppp2r1aQ76MZ3 589 aa14.96□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Stag3O70576 1240 aa14.95□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Talpid3E9PV87 1520 aa14.95□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Zfp444Q3TDV8 331 aaKnown RBP14.95□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Myom2Q14BI5 1463 aa14.95□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Trpm1Q2TV84 1622 aa14.94□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Esx1O88933 382 aa14.94□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Pdcl3Q8BVF2 240 aa14.94□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Dcaf11Q91VU6 549 aa14.94□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Atp1b4Q99ME6 356 aa14.94□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Ino80Q6ZPV2 1559 aa14.93□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Pcdh10E9PXQ7 1057 aa14.93□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Kif7B7ZNG0 1348 aa14.93□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Kiaa0556Q8C753 1610 aa14.93□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Tex14Q7M6U3 1450 aa14.93□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Knl1Q66JQ7 1612 aa14.92□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Tecpr2Q3UH45 1423 aa14.92□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Akap12Q9WTQ5 1684 aa14.92□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Ppp4r2Q0VGB7 417 aa14.92□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Rab3gap2Q8BMG7 1366 aa14.92□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Zmym4A2A791 1549 aaKnown RBP14.91□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Afap1Q80YS6 731 aa14.91□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Ccdc27Q3V036 639 aa14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Igsf3Q6ZQA6 1194 aa14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Stk26Q99JT2 416 aa14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Skint5A7XUY5 1461 aa14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Kiaa1211Q5PR69 1207 aa14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Wdr43Q6ZQL4 677 aaKnown RBP14.9□□□□□ -0.02
Ddx55-201ENSMUST00000071057 Kdm5aQ3UXZ9 1690 aa14.89□□□□□ -0.03
Ddx55-201ENSMUST00000071057 4933402E13RikQ9D4D2 429 aa14.89□□□□□ -0.03
Ddx55-201ENSMUST00000071057 CrbnQ8C7D2 445 aa14.89□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Erbb3Q61526 1339 aa14.89□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Uggt1Q6P5E4 1551 aa14.89□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Nlrp6Q91WS2 869 aa14.88□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Synj2Q9D2G5 1434 aa14.88□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Lrrc7Q80TE7 1490 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Arid4bA2CG63 1314 aaKnown RBP14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 IqubQ8CDK3 788 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Sipa1l1Q8C0T5 1782 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Fam43aQ8BUP8 424 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Mroh1E0CZ22 1640 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 DnmbpQ6TXD4 1580 aa14.87□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Kcnh8P59111 1102 aa14.86□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Hecw2Q6I6G8 1578 aa14.86□□□□□ -0.03
Ddx55-201ENSMUST00000071057 PalldQ9ET54 1408 aa14.86□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Shq1Q7TMX5 569 aa14.85□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Plxnc1Q9QZC2 1574 aa14.85□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Prrc2bQ7TPM1 1486 aaKnown RBP14.85□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Slc52a2Q9D8F3 450 aa14.84□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Adamts7Q68SA9 1657 aa14.84□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Ppp6r1Q7TSI3 856 aa14.84□□□□□ -0.03
Ddx55-201ENSMUST00000071057 Arid4aF8VPQ2 1261 aaKnown RBP14.83□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Kank1E9Q238 1360 aa14.83□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Hfm1D3Z4R1 1434 aa14.83□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Zranb1Q7M760 708 aa14.83□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Ahdc1Q6PAL7 1594 aaKnown RBP14.82□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Slc4a3P16283 1227 aa14.82□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Gtf2a1Q99PM3 378 aa14.81□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Myom1Q62234 1667 aaKnown RBP14.81□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Q9D9H8 365 aa14.81□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Kif16bB1AVY7 1312 aa14.81□□□□□ -0.04
Ddx55-201ENSMUST00000071057 CenpjQ569L8 1344 aa14.8□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Exosc9Q9JHI7 438 aaKnown RBP14.79□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Mink1Q9JM52 1308 aa14.79□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Qser1A2BIE1 1698 aa14.79□□□□□ -0.04
Ddx55-201ENSMUST00000071057 PtprmP28828 1452 aa14.78□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Atf7ipQ7TT18 1306 aa14.78□□□□□ -0.04
Ddx55-201ENSMUST00000071057 InsrP15208 1372 aa14.78□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Neurod2Q62414 383 aa14.78□□□□□ -0.04
Ddx55-201ENSMUST00000071057 Hsp90aa1P07901 733 aaKnown RBP14.77□□□□□ -0.05
Ddx55-201ENSMUST00000071057 CltcQ68FD5 1675 aaKnown RBP14.77□□□□□ -0.05
Ddx55-201ENSMUST00000071057 MaddQ80U28 1577 aa14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 NpatQ8BMA5 1420 aa14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Speer4f1Q9D5Q6 258 aa14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Ift172Q6VH22 1749 aa14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Tmed8Q3UHI4 326 aa14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Utp14aQ640M1 767 aaKnown RBP14.76□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Gprasp1Q5U4C1 1347 aa14.75□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Vsig10D3YX43 558 aa14.75□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Cep170bQ80U49 1574 aa14.74□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Golga2Q921M4 999 aa14.74□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Kif13aQ9EQW7 1749 aa14.74□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Kiaa1107Q80TK0 1369 aa14.74□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Rangap1P46061 589 aaKnown RBP14.73□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Dnajc5gQ8C632 165 aa14.73□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Supt16hQ920B9 1047 aa14.73□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Alpk3Q924C5 1678 aa14.73□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Gpatch11Q3UFS4 262 aa14.73□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Usp19Q3UJD6 1360 aa14.72□□□□□ -0.05
Ddx55-201ENSMUST00000071057 Naip7Q9JIB3 1402 aa14.72□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms