RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm21671G3UY31 267 aa9.26□□□□□ -0.93
Bdnf-201ENSMUST00000053317 PrkcshO08795 521 aa9.26□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Brinp3Q499E0 766 aa9.26□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Brwd3A2AHJ4 1799 aa9.25□□□□□ -0.93
Bdnf-201ENSMUST00000053317 AnkarA2RT91 1465 aa9.25□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Tmf1B9EKI3 1091 aa9.25□□□□□ -0.93
Bdnf-201ENSMUST00000053317 DaxxO35613 739 aa9.25□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Cul9Q80TT8 1865 aa9.24□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Pik3c2gO70167 1506 aa9.24□□□□□ -0.93
Bdnf-201ENSMUST00000053317 TatQ8QZR1 454 aa9.24□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Fbxo41Q6NS60 873 aa9.24□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Rock1P70335 1354 aa9.23□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Sall2Q9QX96 1004 aa9.23□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Fam184bQ0KK56 942 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Slc35g1Q8BY79 368 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Kif16bB1AVY7 1312 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Wwc2Q6NXJ0 1187 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Txnrd1Q9JMH6 613 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Anp32aO35381 247 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Adamtsl3G3UXC7 1706 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Psrc1Q9D0P7 329 aa9.22□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Tns3Q5SSZ5 1440 aa9.21□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Amigo3Q8C2S7 508 aa9.21□□□□□ -0.93
Bdnf-201ENSMUST00000053317 FanciQ8K368 1330 aa9.21□□□□□ -0.93
Bdnf-201ENSMUST00000053317 Akap12Q9WTQ5 1684 aa9.21□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Dennd6aQ8BH65 605 aa9.21□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Dzip1Q8BMD2 852 aa9.21□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Ncoa1P70365 1447 aa9.21□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Rims2Q9EQZ7 1530 aa9.2□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Rad21Q61550 635 aaKnown RBP9.2□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Ciz1Q8VEH2 845 aa9.2□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Polr3aB2RXC6 1390 aa9.2□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Mrs2Q5NCE8 434 aa9.2□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Tcerg1Q8CGF7 1100 aaKnown RBP9.19□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Topbp1Q6ZQF0 1515 aa9.19□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Kif24Q6NWW5 1356 aa9.19□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Zranb3Q6NZP1 1069 aa9.19□□□□□ -0.94
Bdnf-201ENSMUST00000053317 ClspnQ80YR7 1315 aa9.19□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Polr3glQ8R0C0 218 aa9.18□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Myo5cE9Q1F5 1742 aa9.18□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Lrrc7Q80TE7 1490 aa9.18□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Tmem132eQ6IEE6 982 aa9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Ppip5k1A2ARP1 1436 aa9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 PalldQ9ET54 1408 aa9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Cdk13Q69ZA1 1511 aaKnown RBP9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Gm10471E9Q1C7 252 aa9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 TimelessQ9R1X4 1197 aa9.17□□□□□ -0.94
Bdnf-201ENSMUST00000053317 1700019A02RikA0A087WPV9 146 aa9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Med14A2ABV5 1459 aaKnown RBP9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 CatipB9EKE5 520 aa9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Kcna6Q61923 529 aa9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Idi2Q8BFZ6 227 aa9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 U2af1Q9D883 239 aaKnown RBP9.16□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Dip2aQ8BWT5 1523 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Zscan10Q3URR7 782 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Trim26Q99PN3 545 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Frmpd2A0A140LI67 1392 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Gimap6Q8K349 305 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Myo3aQ8K3H5 1613 aa9.15□□□□□ -0.94
Bdnf-201ENSMUST00000053317 Dot1lQ6XZL8 1540 aa9.15□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Fmnl2A2APV2 1086 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Sgsm1Q8BPQ7 1093 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Fam50bQ9WTJ8 334 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Dnajc10Q9DC23 793 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Topaz1E5FYH1 1653 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Scn4aQ9ER60 1841 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Nckap5lQ6GQX2 1323 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 MypopQ8R4U1 393 aa9.14□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Mug2P28666 1451 aa9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Sema6bO54951 886 aa9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Zpr1Q62384 459 aa9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Arhgef1Q61210 920 aaKnown RBP9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Chrna2Q91X60 512 aa9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Tulp4Q9JIL5 1547 aa9.13□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Abca17E9PX95 1733 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Wdr17E9Q271 1322 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Map3k19E9Q3S4 1311 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Fam71e1A1L3C1 212 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Neurod2Q62414 383 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Iqgap3F8VQ29 1632 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Arhgap23Q69ZH9 1483 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 MpripP97434 1024 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Ccne1Q61457 408 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Emilin2Q8K482 1074 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Lamc1P02468 1607 aaKnown RBP9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 NinlQ6ZQ12 1394 aa9.12□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Bcl9Q9D219 1425 aa9.11□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.11□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Pibf1E9Q6K3 756 aa9.11□□□□□ -0.95
Bdnf-201ENSMUST00000053317 ZgpatQ8VDM1 511 aa9.11□□□□□ -0.95
Bdnf-201ENSMUST00000053317 RalgapbQ8BQZ4 1484 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Ybx3Q9JKB3 361 aaKnown RBP9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Dip2bQ3UH60 1574 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 PrxO55103 1391 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Tnnt1O88346 262 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Tsen2Q6P7W5 460 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Exoc6Q8R313 802 aa9.1□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Gm21680A0A0G2JGR8 267 aa9.09□□□□□ -0.95
Bdnf-201ENSMUST00000053317 RictorQ6QI06 1708 aa9.09□□□□□ -0.95
Bdnf-201ENSMUST00000053317 Adamts7Q68SA9 1657 aa9.09□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 221.2 ms