RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 AI481877A2ALV5 1481 aa12.99□□□□□ -0.33
Trim17-201ENSMUST00000047697 Dusp27Q148W8 1138 aa12.99□□□□□ -0.33
Trim17-201ENSMUST00000047697 Edc4Q3UJB9 1406 aaKnown RBP12.99□□□□□ -0.33
Trim17-201ENSMUST00000047697 Cald1E9QA15 768 aaKnown RBP12.98□□□□□ -0.33
Trim17-201ENSMUST00000047697 Tmc1Q8R4P5 757 aa12.98□□□□□ -0.33
Trim17-201ENSMUST00000047697 Plin1Q8CGN5 517 aa12.98□□□□□ -0.33
Trim17-201ENSMUST00000047697 Cog6Q8R3I3 657 aa12.98□□□□□ -0.33
Trim17-201ENSMUST00000047697 Map4k4P97820 1233 aaKnown RBP12.97□□□□□ -0.33
Trim17-201ENSMUST00000047697 Ppp1r3fQ9JIG4 799 aa12.97□□□□□ -0.33
Trim17-201ENSMUST00000047697 Catsper2A2ARP9 588 aa12.96□□□□□ -0.33
Trim17-201ENSMUST00000047697 G3bp1P97855 465 aaKnown RBP12.96□□□□□ -0.33
Trim17-201ENSMUST00000047697 Gm14025A2AP89 1413 aa12.96□□□□□ -0.33
Trim17-201ENSMUST00000047697 Kif18aQ91WD7 886 aa12.96□□□□□ -0.34
Trim17-201ENSMUST00000047697 4933402E13RikQ9D4D2 429 aa12.96□□□□□ -0.34
Trim17-201ENSMUST00000047697 Kiaa1107Q80TK0 1369 aa12.96□□□□□ -0.34
Trim17-201ENSMUST00000047697 Mcm4P49717 862 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Abcc6Q9R1S7 1498 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Setd1aE9PYH6 1716 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 1700019A02RikA0A087WPV9 146 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 PtmaP26350 111 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Tbc1d32Q3URV1 1296 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Ttc21bQ0HA38 1315 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Fgd6Q69ZL1 1399 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Fam208aQ69ZR9 1610 aaKnown RBP12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 Setd1bQ8CFT2 1985 aa12.95□□□□□ -0.34
Trim17-201ENSMUST00000047697 U2surpQ6NV83 1029 aaKnown RBP12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Paxip1Q6NZQ4 1056 aa12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Gtf2a1Q99PM3 378 aa12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Ppip5k1A2ARP1 1436 aa12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Rbm25B2RY56 838 aaKnown RBP12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Maco1Q7TQE6 664 aaKnown RBP12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 Phf14Q9D4H9 881 aa12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 CenpjQ569L8 1344 aa12.94□□□□□ -0.34
Trim17-201ENSMUST00000047697 AampJ3QN89 436 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Rsph3aQ3UFY4 516 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Rrbp1Q99PL5 1605 aaKnown RBP12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Birc3O08863 600 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 SkilQ60665 675 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Erich6bQ9D4S6 220 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Tulp4Q9JIL5 1547 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Stk11ipQ3TAA7 1072 aa12.93□□□□□ -0.34
Trim17-201ENSMUST00000047697 Ccdc146E9Q9F7 977 aa12.92□□□□□ -0.34
Trim17-201ENSMUST00000047697 Aplp1Q03157 653 aa12.92□□□□□ -0.34
Trim17-201ENSMUST00000047697 Zranb1Q7M760 708 aa12.92□□□□□ -0.34
Trim17-201ENSMUST00000047697 Zmym3Q9JLM4 1370 aa12.92□□□□□ -0.34
Trim17-201ENSMUST00000047697 AU019823E9PUQ3 292 aa12.92□□□□□ -0.34
Trim17-201ENSMUST00000047697 Col17a1Q07563 1470 aa12.91□□□□□ -0.34
Trim17-201ENSMUST00000047697 Adamts13Q769J6 1426 aa12.91□□□□□ -0.34
Trim17-201ENSMUST00000047697 Mast1Q9R1L5 1570 aa12.91□□□□□ -0.34
Trim17-201ENSMUST00000047697 Terf2O35144 541 aa12.91□□□□□ -0.34
Trim17-201ENSMUST00000047697 Phlpp2Q8BXA7 1320 aa12.91□□□□□ -0.34
Trim17-201ENSMUST00000047697 Tfip11Q9ERA6 838 aaKnown RBP12.9□□□□□ -0.35
Trim17-201ENSMUST00000047697 Pbrm1Q8BSQ9 1634 aaKnown RBP12.89□□□□□ -0.35
Trim17-201ENSMUST00000047697 Nek4Q9Z1J2 792 aa12.89□□□□□ -0.35
Trim17-201ENSMUST00000047697 Il4rP16382 810 aa12.89□□□□□ -0.35
Trim17-201ENSMUST00000047697 Rrp12Q6P5B0 1295 aaKnown RBP12.89□□□□□ -0.35
Trim17-201ENSMUST00000047697 Znf316Q6PGE4 1016 aa12.88□□□□□ -0.35
Trim17-201ENSMUST00000047697 Rrp9Q91WM3 475 aaKnown RBP12.88□□□□□ -0.35
Trim17-201ENSMUST00000047697 Atp10dQ8K2X1 1416 aa12.88□□□□□ -0.35
Trim17-201ENSMUST00000047697 Pdlim2Q8R1G6 349 aa12.87□□□□□ -0.35
Trim17-201ENSMUST00000047697 Cavin4A2AMM0 362 aa12.87□□□□□ -0.35
Trim17-201ENSMUST00000047697 IbtkQ6ZPR6 1352 aaKnown RBP12.87□□□□□ -0.35
Trim17-201ENSMUST00000047697 P2rx7Q9Z1M0 595 aa12.87□□□□□ -0.35
Trim17-201ENSMUST00000047697 Fam135bQ9DAI6 1403 aa12.87□□□□□ -0.35
Trim17-201ENSMUST00000047697 Shq1Q7TMX5 569 aa12.86□□□□□ -0.35
Trim17-201ENSMUST00000047697 Pibf1E9Q6K3 756 aa12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Znf521Q6KAS7 1311 aa12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 CastP51125 788 aa12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Utp14aQ640M1 767 aaKnown RBP12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Plppr3Q7TPB0 716 aa12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Chmp4bQ9D8B3 224 aaKnown RBP12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Clasp1Q80TV8 1535 aaKnown RBP12.85□□□□□ -0.35
Trim17-201ENSMUST00000047697 Cep170Q6A065 1588 aa12.84□□□□□ -0.35
Trim17-201ENSMUST00000047697 Swt1Q9DBQ9 907 aa12.84□□□□□ -0.35
Trim17-201ENSMUST00000047697 Casq1O09165 405 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Kif20aP97329 887 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Cfap74Q3UY96 1578 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Ythdc1E9Q5K9 736 aaKnown RBP12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Nsfl1cQ9CZ44 370 aaKnown RBP12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Antxr1Q9CZ52 562 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Pola1P33609 1465 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Kdm5aQ3UXZ9 1690 aa12.83□□□□□ -0.36
Trim17-201ENSMUST00000047697 Triml2E9PW10 424 aa12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 Chmp4cQ9D7F7 232 aa12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 Tubgcp6G5E8P0 1769 aa12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 Usp54Q8BL06 1588 aaKnown RBP12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 HnrnpuQ8VEK3 800 aaKnown RBP12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 Kcnn1Q9EQR3 537 aa12.82□□□□□ -0.36
Trim17-201ENSMUST00000047697 Ccdc171E9Q1U1 1324 aa12.81□□□□□ -0.36
Trim17-201ENSMUST00000047697 Ddrgk1Q80WW9 315 aa12.81□□□□□ -0.36
Trim17-201ENSMUST00000047697 Eif4g2Q62448 906 aaKnown RBP12.81□□□□□ -0.36
Trim17-201ENSMUST00000047697 PalmQ9Z0P4 383 aa12.81□□□□□ -0.36
Trim17-201ENSMUST00000047697 Kif1bQ60575 1816 aaKnown RBP12.81□□□□□ -0.36
Trim17-201ENSMUST00000047697 Usp16Q99LG0 825 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Nphp4P59240 1425 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Q3UPC7 1272 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Plekhm2Q80TQ5 1018 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Cetn4Q8K4K1 168 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 AatkQ80YE4 1365 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Scaf11E9PZM7 1456 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms