RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Rad21Q61550 635 aaKnown RBP28.22■■■□□ 2.11
Ccdc9-201ENSMUST00000041010 Myo3aQ8K3H5 1613 aa28.22■■■□□ 2.11
Ccdc9-201ENSMUST00000041010 Arhgap23Q69ZH9 1483 aa28.22■■■□□ 2.11
Ccdc9-201ENSMUST00000041010 Sipa1l1Q8C0T5 1782 aa28.2■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 AU015836B2RUM3 263 aa28.19■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Q7TT23 1179 aa28.19■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Chmp5Q9D7S9 219 aa28.18■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Myom1Q62234 1667 aaKnown RBP28.17■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Itsn2Q9Z0R6 1659 aa28.16■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Stard8Q8K031 1019 aa28.16■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 DnmbpQ6TXD4 1580 aa28.16■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Dbr1Q923B1 550 aa28.15■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Adamtsl3G3UXC7 1706 aa28.14■■■□□ 2.1
Ccdc9-201ENSMUST00000041010 Afap1Q80YS6 731 aa28.14■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Kdm2aP59997 1161 aa28.12■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Srpk2O54781 681 aaKnown RBP28.11■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Nphp4P59240 1425 aa28.11■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Gm20521D3Z5F7 333 aa28.1■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Smc5Q8CG46 1101 aaKnown RBP28.1■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Srcin1Q9QWI6 1250 aa28.1■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Tmc1Q8R4P5 757 aa28.09■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Rrp9Q91WM3 475 aaKnown RBP28.09■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Arid4bA2CG63 1314 aaKnown RBP28.09■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Kif13aQ9EQW7 1749 aa28.09■■■□□ 2.09
Ccdc9-201ENSMUST00000041010 Rwdd1Q9CQK7 243 aa28.07■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Itsn1Q9Z0R4 1714 aa28.07■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Sbno1Q689Z5 1390 aa28.06■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Kif16bB1AVY7 1312 aa28.06■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Mapk8ip3Q9ESN9 1337 aa28.06■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Eif2s2Q99L45 331 aaKnown RBP28.06■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Os9Q8K2C7 672 aa28.06■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Ipo8Q7TMY7 1010 aa28.04■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Slc52a2Q9D8F3 450 aa28.04■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Ift172Q6VH22 1749 aa28.04■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 AU022751B1B0V2 589 aa28.03■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Kdm5aQ3UXZ9 1690 aa28.02■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Tex14Q7M6U3 1450 aa28.02■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Ppp1r9bQ6R891 817 aaKnown RBP28.02■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Htatsf1Q8BGC0 757 aa28.02■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Prrc2bQ7TPM1 1486 aaKnown RBP28.02■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 PtprmP28828 1452 aa28.01■■■□□ 2.08
Ccdc9-201ENSMUST00000041010 Plekhh1Q80TI1 1356 aa28.01■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Med14A2ABV5 1459 aaKnown RBP28.01■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Fan1Q69ZT1 1020 aa28■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Ak7Q9D2H2 614 aa27.99■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 4933402E13RikQ9D4D2 429 aa27.99■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Hsp90ab1P11499 724 aaKnown RBP27.97■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Gtf2e1Q9D0D5 440 aa27.97■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Zc3h13E9Q784 1729 aaKnown RBP27.97■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Puf60Q3UEB3 564 aaKnown RBP27.97■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Usp40Q8BWR4 1235 aa27.96■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Phf14Q9D4H9 881 aa27.96■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Lrrc7Q80TE7 1490 aa27.96■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 PalldQ9ET54 1408 aa27.96■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Naip7Q9JIB3 1402 aa27.96■■■□□ 2.07
Ccdc9-201ENSMUST00000041010 Kif20aP97329 887 aa27.94■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Trim30dE9PWL0 497 aa27.94■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 AampJ3QN89 436 aa27.93■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Esx1O88933 382 aa27.93■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Dnajc5P60904 198 aa27.93■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Dnajc5gQ8C632 165 aa27.92■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Arhgef28P97433 1693 aa27.92■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Eif2ak4Q9QZ05 1648 aa27.92■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 MaddQ80U28 1577 aa27.91■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 PrxO55103 1391 aa27.9■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 CrbnQ8C7D2 445 aa27.9■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Ercc6l2Q9JIM3 1537 aa27.89■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Zbtb4Q5F293 982 aa27.89■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Dnttip2Q8R2M2 758 aaKnown RBP27.89■■■□□ 2.06
Ccdc9-201ENSMUST00000041010 Ccdc183A2AJB1 534 aa27.88■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Dcaf11Q91VU6 549 aa27.88■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Pank3Q8R2W9 370 aa27.88■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 DmtnQ9WV69 405 aa27.87■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 PplQ9R269 1755 aa27.87■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Chd2E9PZM4 1827 aaKnown RBP27.87■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Tmf1B9EKI3 1091 aa27.85■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Gemin5Q8BX17 1502 aaKnown RBP27.84■■■□□ 2.05
Ccdc9-201ENSMUST00000041010 Rtn4Q99P72 1162 aaKnown RBP27.82■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Inpp5dQ9ES52 1191 aa27.82■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Gm16486A0A1D5RMD1 1434 aa27.82■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Zscan10Q3URR7 782 aa27.8■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 4930567H17RikQ3V0K5 233 aa27.8■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 IqubQ8CDK3 788 aa27.8■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Apbb1Q9QXJ1 710 aa27.8■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Gm6268A2A3U9 297 aa27.79■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Znf692Q3U381 531 aa27.78■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Atf7ipQ7TT18 1306 aa27.78■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Dip2aQ8BWT5 1523 aa27.76■■■□□ 2.04
Ccdc9-201ENSMUST00000041010 Dip2bQ3UH60 1574 aa27.76■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Fam184bQ0KK56 942 aa27.75■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 InsrP15208 1372 aa27.75■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Stag3O70576 1240 aa27.74■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Slc4a1apE9PX68 744 aa27.74■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Sptbn5F6UCX4 1208 aa27.74■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Shq1Q7TMX5 569 aa27.73■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Safb2Q80YR5 991 aaKnown RBP27.73■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Antxr1Q9CZ52 562 aa27.73■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Ppp2r1aQ76MZ3 589 aa27.73■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 Plekhg1F6S200 1446 aa27.72■■■□□ 2.03
Ccdc9-201ENSMUST00000041010 CenpjQ569L8 1344 aa27.7■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms