RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C TY2B-DR3Q07791 1770 aaKnown RBP0.5□□□□□ -2.33
CCL1YPR025C YKL065W-AQ2V2P2 73 aa0.5□□□□□ -2.33
CCL1YPR025C YPR108W-AQ3E7B3 70 aa0.5□□□□□ -2.33
CCL1YPR025C DOP1Q03921 1698 aa0.49□□□□□ -2.33
CCL1YPR025C YKL068W-AQ3E826 78 aa0.49□□□□□ -2.33
CCL1YPR025C ATX1P38636 73 aa0.48□□□□□ -2.33
CCL1YPR025C YOL097W-AQ3E7Y9 61 aa0.48□□□□□ -2.33
CCL1YPR025C YGR121W-AQ3E816 71 aa0.48□□□□□ -2.33
CCL1YPR025C SWM2P40342 146 aa0.45□□□□□ -2.34
CCL1YPR025C YDR119W-AQ2V2P9 66 aa0.45□□□□□ -2.34
CCL1YPR025C SEN1Q00416 2231 aaKnown RBP0.45□□□□□ -2.34
CCL1YPR025C QCR9P22289 66 aa0.44□□□□□ -2.34
CCL1YPR025C YBR032WP38223 100 aa0.44□□□□□ -2.34
CCL1YPR025C EDC1P53080 175 aaPredicted RBP0.44□□□□□ -2.34
CCL1YPR025C YGR035W-AQ45U48 73 aa0.42□□□□□ -2.34
CCL1YPR025C ARO1P08566 1588 aaKnown RBP0.41□□□□□ -2.34
CCL1YPR025C NUP159P40477 1460 aa0.41□□□□□ -2.34
CCL1YPR025C FKS3Q04952 1785 aa0.4□□□□□ -2.35
CCL1YPR025C TIM12P32830 109 aa0.4□□□□□ -2.35
CCL1YPR025C YOR032W-AQ8TGS1 66 aa0.39□□□□□ -2.35
CCL1YPR025C YGR025WP53216 100 aa0.38□□□□□ -2.35
CCL1YPR025C ATP17Q06405 101 aa0.38□□□□□ -2.35
CCL1YPR025C YHR213W-AQ8TGT4 77 aa0.38□□□□□ -2.35
CCL1YPR025C IRC20Q06554 1556 aa0.37□□□□□ -2.35
CCL1YPR025C YBL044WP38194 122 aa0.37□□□□□ -2.35
CCL1YPR025C LSM2P38203 95 aaKnown RBP0.37□□□□□ -2.35
CCL1YPR025C YKL018C-AQ3E7A7 99 aa0.37□□□□□ -2.35
CCL1YPR025C YCR108CQ3E819 63 aa0.37□□□□□ -2.35
CCL1YPR025C KOG1P38873 1557 aa0.36□□□□□ -2.35
CCL1YPR025C UFD4P33202 1483 aa0.35□□□□□ -2.35
CCL1YPR025C MMS1Q06211 1407 aa0.35□□□□□ -2.35
CCL1YPR025C SMC4Q12267 1418 aa0.35□□□□□ -2.35
CCL1YPR025C DNF1P32660 1571 aa0.35□□□□□ -2.35
CCL1YPR025C RPO21P04050 1733 aaKnown RBP0.35□□□□□ -2.35
CCL1YPR025C DNF2Q12675 1612 aa0.33□□□□□ -2.36
CCL1YPR025C IML1P47170 1584 aa0.32□□□□□ -2.36
CCL1YPR025C PAU7P39545 55 aa0.32□□□□□ -2.36
CCL1YPR025C RRP5Q05022 1729 aaKnown RBP0.32□□□□□ -2.36
CCL1YPR025C TCB3Q03640 1545 aaKnown RBP0.32□□□□□ -2.36
CCL1YPR025C RPS27AP35997 82 aaKnown RBP0.31□□□□□ -2.36
CCL1YPR025C SCC2Q04002 1493 aa0.3□□□□□ -2.36
CCL1YPR025C YLR146W-AQ2V2P1 62 aa0.3□□□□□ -2.36
CCL1YPR025C SPI1P40092 148 aa0.28□□□□□ -2.36
CCL1YPR025C ERI1P62651 68 aaKnown RBP0.28□□□□□ -2.36
CCL1YPR025C TY3B-GQ99315 1547 aa0.28□□□□□ -2.37
CCL1YPR025C PAI3P01094 68 aa0.27□□□□□ -2.37
CCL1YPR025C YBR200W-AQ3E755 54 aa0.27□□□□□ -2.37
CCL1YPR025C YDR246W-AQ3E763 66 aa0.27□□□□□ -2.37
CCL1YPR025C SSS1P35179 80 aa0.26□□□□□ -2.37
CCL1YPR025C YFL041W-AQ3E817 63 aa0.26□□□□□ -2.37
CCL1YPR025C YBL039W-BP0C268 59 aa0.25□□□□□ -2.37
CCL1YPR025C OLI1P61829 76 aa0.25□□□□□ -2.37
CCL1YPR025C SPO14P36126 1683 aa0.24□□□□□ -2.37
CCL1YPR025C YOR394C-AQ8TGJ0 55 aa0.24□□□□□ -2.37
CCL1YPR025C HAP1P0CE41 1502 aa0.23□□□□□ -2.37
CCL1YPR025C VTH1P40438 1549 aa0.23□□□□□ -2.37
CCL1YPR025C VTH2P40890 1549 aa0.23□□□□□ -2.37
CCL1YPR025C RPO31P04051 1460 aa0.22□□□□□ -2.37
CCL1YPR025C YOR011W-AQ3E807 68 aa0.22□□□□□ -2.37
CCL1YPR025C VPS15P22219 1454 aa0.21□□□□□ -2.38
CCL1YPR025C IQG1Q12280 1495 aa0.2□□□□□ -2.38
CCL1YPR025C HUB1Q6Q546 73 aa0.19□□□□□ -2.38
CCL1YPR025C VMR1P38735 1592 aa0.19□□□□□ -2.38
CCL1YPR025C SIP18P50263 79 aa0.18□□□□□ -2.38
CCL1YPR025C YDR182W-AQ3E796 67 aa0.18□□□□□ -2.38
CCL1YPR025C UTP20P35194 2493 aaKnown RBP0.18□□□□□ -2.38
CCL1YPR025C MYO4P32492 1471 aa0.17□□□□□ -2.38
CCL1YPR025C RPS30AP0CX33 63 aaKnown RBP0.16□□□□□ -2.38
CCL1YPR025C RPS30BP0CX34 63 aaKnown RBP0.16□□□□□ -2.38
CCL1YPR025C YSY6P38374 65 aa0.15□□□□□ -2.39
CCL1YPR025C BCK1Q01389 1478 aa0.12□□□□□ -2.39
CCL1YPR025C YOR008C-AQ3E7B9 74 aa0.12□□□□□ -2.39
CCL1YPR025C YMR001C-AQ8TGS9 76 aa0.12□□□□□ -2.39
CCL1YPR025C RPS29AP41057 56 aaKnown RBP0.1□□□□□ -2.39
CCL1YPR025C YIL102C-AQ2V2P5 75 aa0.1□□□□□ -2.39
CCL1YPR025C TOS6P48560 102 aa0.09□□□□□ -2.4
CCL1YPR025C RPS27BP38711 82 aa0.08□□□□□ -2.4
CCL1YPR025C PDR12Q02785 1511 aa0.08□□□□□ -2.4
CCL1YPR025C YOL131WQ08270 108 aa0.07□□□□□ -2.4
CCL1YPR025C PDR15Q04182 1529 aaKnown RBP0.07□□□□□ -2.4
CCL1YPR025C TY1B-DR4Q07793 1604 aa0.05□□□□□ -2.4
CCL1YPR025C YOL166W-AQ8TGJ1 51 aa0.05□□□□□ -2.4
CCL1YPR025C TOR1P35169 2470 aa0.05□□□□□ -2.4
CCL1YPR025C YLR157W-DP0CE99 70 aa0.03□□□□□ -2.4
CCL1YPR025C YBR056W-AI2HB52 66 aa0.02□□□□□ -2.41
CCL1YPR025C YBT1P32386 1661 aa0.02□□□□□ -2.41
CCL1YPR025C YFR010W-AP0C5N0 62 aa-0.03□□□□□ -2.41
CCL1YPR025C YBR230W-AQ3E762 66 aa-0.03□□□□□ -2.41
CCL1YPR025C YGR146C-AQ8TGT9 53 aa-0.04□□□□□ -2.42
CCL1YPR025C VMA9Q3E7B6 73 aa-0.06□□□□□ -2.42
CCL1YPR025C CDC25P04821 1589 aa-0.09□□□□□ -2.42
CCL1YPR025C YLL006W-AQ3E814 58 aa-0.09□□□□□ -2.42
CCL1YPR025C NUP188P52593 1655 aaKnown RBP-0.09□□□□□ -2.42
CCL1YPR025C YCF1P39109 1515 aaKnown RBP-0.09□□□□□ -2.42
CCL1YPR025C YOR093CQ12275 1648 aa-0.12□□□□□ -2.43
CCL1YPR025C YOR192C-CQ3E736 78 aa-0.12□□□□□ -2.43
CCL1YPR025C SNQ2P32568 1501 aaKnown RBP-0.13□□□□□ -2.43
CCL1YPR025C PDR5P33302 1511 aaKnown RBP-0.13□□□□□ -2.43
CCL1YPR025C YDR524C-BQ3E6R4 66 aa-0.13□□□□□ -2.43
CCL1YPR025C USO1P25386 1790 aa-0.14□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms