RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	TY4B-H	P0C2J7	1802 aa		0.67	□□□□□ -2.3
CTR9	YOL145C	TCB3	Q03640	1545 aa	Known RBP	0.67	□□□□□ -2.3
CTR9	YOL145C	TY1B-DR1	Q03855	1755 aa		0.67	□□□□□ -2.3
CTR9	YOL145C	TY1B-DR3	Q99231	1755 aa		0.67	□□□□□ -2.3
CTR9	YOL145C	YLR157W-E	P0CF00	54 aa		0.67	□□□□□ -2.3
CTR9	YOL145C	RPS30A	P0CX33	63 aa	Known RBP	0.67	□□□□□ -2.3
CTR9	YOL145C	RPS30B	P0CX34	63 aa	Known RBP	0.67	□□□□□ -2.3
CTR9	YOL145C	YBR072C-A	Q3E794	53 aa		0.67	□□□□□ -2.3
CTR9	YOL145C	XRN1	P22147	1528 aa	Known RBP	0.67	□□□□□ -2.3
CTR9	YOL145C	SCC2	Q04002	1493 aa		0.66	□□□□□ -2.3
CTR9	YOL145C	RPL38	P49167	78 aa	Known RBP	0.66	□□□□□ -2.3
CTR9	YOL145C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.66	□□□□□ -2.3
CTR9	YOL145C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.66	□□□□□ -2.3
CTR9	YOL145C	VPS13	Q07878	3144 aa		0.66	□□□□□ -2.3
CTR9	YOL145C	HIR3	P47171	1648 aa		0.65	□□□□□ -2.31
CTR9	YOL145C	ATP17	Q06405	101 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	TOR2	P32600	2474 aa	Known RBP	0.64	□□□□□ -2.31
CTR9	YOL145C	MEC1	P38111	2368 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	YDR246W-A	Q3E763	66 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	THO2	P53552	1597 aa	Known RBP	0.64	□□□□□ -2.31
CTR9	YOL145C	SSK2	P53599	1579 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	TY2B-C	P25384	1770 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	UTP10	P42945	1769 aa	Known RBP	0.64	□□□□□ -2.31
CTR9	YOL145C	TY2B-DR1	Q12472	1770 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	YFR009W-A	P0C5M9	85 aa		0.64	□□□□□ -2.31
CTR9	YOL145C	RPL37B	P51402	88 aa	Known RBP	0.63	□□□□□ -2.31
CTR9	YOL145C	RPO31	P04051	1460 aa		0.63	□□□□□ -2.31
CTR9	YOL145C	MYO4	P32492	1471 aa		0.63	□□□□□ -2.31
CTR9	YOL145C	YBL039W-B	P0C268	59 aa		0.63	□□□□□ -2.31
CTR9	YOL145C	SPI1	P40092	148 aa		0.63	□□□□□ -2.31
CTR9	YOL145C	YOL097W-A	Q3E7Y9	61 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	HUB1	Q6Q546	73 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	MMS1	Q06211	1407 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	DOP1	Q03921	1698 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-DR5	P0C2I2	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-DR6	P0C2I3	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-LR2	P0C2I5	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-JR1	P47098	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-ML2	Q03434	1755 aa	Known RBP	0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-ER1	Q03612	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-ML1	Q04711	1755 aa	Known RBP	0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-GR2	Q12269	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-OL	Q12273	1755 aa		0.62	□□□□□ -2.31
CTR9	YOL145C	TY1B-PL	Q12414	1755 aa	Known RBP	0.62	□□□□□ -2.31
CTR9	YOL145C	TY2B-LR1	P0C2J3	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-F	P0CX63	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-GR2	P0CX64	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-DR2	Q03494	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-OR1	Q12113	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-B	Q12491	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY2B-OR2	Q12501	1770 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	YLR157W-D	P0CE99	70 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	BPT1	P14772	1559 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-JR2	P47100	1755 aa	Known RBP	0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-ER2	Q03619	1755 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-MR2	Q04670	1755 aa	Known RBP	0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-LR1	Q12088	1755 aa	Known RBP	0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-GR3	Q12316	1755 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	TY1B-OR	Q92393	1755 aa		0.61	□□□□□ -2.31
CTR9	YOL145C	VPS15	P22219	1454 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	YBR032W	P38223	100 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	IQG1	Q12280	1495 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	YBR200W-A	Q3E755	54 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	TY2B-DR3	Q07791	1770 aa	Known RBP	0.6	□□□□□ -2.31
CTR9	YOL145C	YMR001C-A	Q8TGS9	76 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	DNF2	Q12675	1612 aa		0.6	□□□□□ -2.31
CTR9	YOL145C	SMC4	Q12267	1418 aa		0.59	□□□□□ -2.31
CTR9	YOL145C	PMD1	P32634	1753 aa		0.59	□□□□□ -2.31
CTR9	YOL145C	SIP18	P50263	79 aa		0.59	□□□□□ -2.32
CTR9	YOL145C	HAP1	P0CE41	1502 aa		0.59	□□□□□ -2.32
CTR9	YOL145C	YOL166W-A	Q8TGJ1	51 aa		0.59	□□□□□ -2.32
CTR9	YOL145C	YDR182W-A	Q3E796	67 aa		0.58	□□□□□ -2.32
CTR9	YOL145C	YOR394C-A	Q8TGJ0	55 aa		0.58	□□□□□ -2.32
CTR9	YOL145C	RPS27A	P35997	82 aa	Known RBP	0.57	□□□□□ -2.32
CTR9	YOL145C	OLI1	P61829	76 aa		0.57	□□□□□ -2.32
CTR9	YOL145C	TY1B-BL	Q12490	1755 aa		0.57	□□□□□ -2.32
CTR9	YOL145C	ESP1	Q03018	1630 aa		0.57	□□□□□ -2.32
CTR9	YOL145C	YBL044W	P38194	122 aa		0.57	□□□□□ -2.32
CTR9	YOL145C	YBR016W	P38216	128 aa		0.57	□□□□□ -2.32
CTR9	YOL145C	TY1B-MR1	Q04214	1755 aa		0.56	□□□□□ -2.32
CTR9	YOL145C	TY1B-NL1	Q12112	1755 aa		0.56	□□□□□ -2.32
CTR9	YOL145C	TY1B-GR1	Q12141	1755 aa		0.56	□□□□□ -2.32
CTR9	YOL145C	DNF3	Q12674	1656 aa		0.56	□□□□□ -2.32
CTR9	YOL145C	TY3B-G	Q99315	1547 aa		0.56	□□□□□ -2.32
CTR9	YOL145C	RRP5	Q05022	1729 aa	Known RBP	0.55	□□□□□ -2.32
CTR9	YOL145C	RIM15	P43565	1770 aa		0.55	□□□□□ -2.32
CTR9	YOL145C	YOR011W-A	Q3E807	68 aa		0.55	□□□□□ -2.32
CTR9	YOL145C	HKR1	P41809	1802 aa		0.55	□□□□□ -2.32
CTR9	YOL145C	YKL023C-A	Q2V2P3	75 aa		0.54	□□□□□ -2.32
CTR9	YOL145C	IML1	P47170	1584 aa		0.54	□□□□□ -2.32
CTR9	YOL145C	TY1B-DR4	Q07793	1604 aa		0.54	□□□□□ -2.32
CTR9	YOL145C	FKS3	Q04952	1785 aa		0.53	□□□□□ -2.32
CTR9	YOL145C	YCR108C	Q3E819	63 aa		0.53	□□□□□ -2.32
CTR9	YOL145C	SPT6	P23615	1451 aa	Known RBP	0.53	□□□□□ -2.32
CTR9	YOL145C	CDC25	P04821	1589 aa		0.53	□□□□□ -2.32
CTR9	YOL145C	SNQ2	P32568	1501 aa	Known RBP	0.52	□□□□□ -2.33
CTR9	YOL145C	VTH1	P40438	1549 aa		0.52	□□□□□ -2.33
CTR9	YOL145C	VTH2	P40890	1549 aa		0.52	□□□□□ -2.33
CTR9	YOL145C	YGR025W	P53216	100 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms