RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C TY1B-LR1Q12088 1755 aaKnown RBP0.52□□□□□ -2.33
WHI3YNL197C TY1B-GR2Q12269 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-OLQ12273 1755 aa0.52□□□□□ -2.33
WHI3YNL197C TY1B-DR3Q99231 1755 aa0.52□□□□□ -2.33
WHI3YNL197C MLP1Q02455 1875 aaKnown RBP0.52□□□□□ -2.33
WHI3YNL197C KOG1P38873 1557 aa0.52□□□□□ -2.33
WHI3YNL197C QCR9P22289 66 aa0.52□□□□□ -2.33
WHI3YNL197C SGF11Q03067 99 aa0.52□□□□□ -2.33
WHI3YNL197C YDR119W-AQ2V2P9 66 aa0.52□□□□□ -2.33
WHI3YNL197C YPR108W-AQ3E7B3 70 aa0.52□□□□□ -2.33
WHI3YNL197C YGR121W-AQ3E816 71 aa0.51□□□□□ -2.33
WHI3YNL197C HKR1P41809 1802 aa0.51□□□□□ -2.33
WHI3YNL197C STT4P37297 1900 aa0.5□□□□□ -2.33
WHI3YNL197C YGR025WP53216 100 aa0.5□□□□□ -2.33
WHI3YNL197C YHR213W-AQ8TGT4 77 aa0.5□□□□□ -2.33
WHI3YNL197C YOR093CQ12275 1648 aa0.5□□□□□ -2.33
WHI3YNL197C APC1P53886 1748 aa0.5□□□□□ -2.33
WHI3YNL197C IRA2P19158 3079 aa0.5□□□□□ -2.33
WHI3YNL197C TY1B-NL2Q99337 1749 aaKnown RBP0.49□□□□□ -2.33
WHI3YNL197C ATP17Q06405 101 aa0.48□□□□□ -2.33
WHI3YNL197C YGR035W-AQ45U48 73 aa0.48□□□□□ -2.33
WHI3YNL197C TY2B-CP25384 1770 aa0.48□□□□□ -2.33
WHI3YNL197C TY2B-DR1Q12472 1770 aa0.48□□□□□ -2.33
WHI3YNL197C NUP159P40477 1460 aa0.48□□□□□ -2.33
WHI3YNL197C YDL022C-AP0C5L6 82 aa0.48□□□□□ -2.33
WHI3YNL197C DOP1Q03921 1698 aa0.47□□□□□ -2.33
WHI3YNL197C BPH1P25356 2167 aa0.47□□□□□ -2.33
WHI3YNL197C PDR15Q04182 1529 aaKnown RBP0.44□□□□□ -2.34
WHI3YNL197C LSM2P38203 95 aaKnown RBP0.44□□□□□ -2.34
WHI3YNL197C UFD4P33202 1483 aa0.44□□□□□ -2.34
WHI3YNL197C PAU7P39545 55 aa0.43□□□□□ -2.34
WHI3YNL197C SPI1P40092 148 aa0.43□□□□□ -2.34
WHI3YNL197C MMS1Q06211 1407 aa0.43□□□□□ -2.34
WHI3YNL197C PAI3P01094 68 aa0.43□□□□□ -2.34
WHI3YNL197C TY2B-LR1P0C2J3 1770 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-FP0CX63 1770 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-GR2P0CX64 1770 aa0.42□□□□□ -2.34
WHI3YNL197C PMD1P32634 1753 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-DR2Q03494 1770 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-OR1Q12113 1770 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-BQ12491 1770 aa0.42□□□□□ -2.34
WHI3YNL197C TY2B-OR2Q12501 1770 aa0.42□□□□□ -2.34
WHI3YNL197C YFL041W-AQ3E817 63 aa0.42□□□□□ -2.34
WHI3YNL197C TIM12P32830 109 aa0.41□□□□□ -2.34
WHI3YNL197C YBL044WP38194 122 aa0.41□□□□□ -2.34
WHI3YNL197C IML1P47170 1584 aa0.41□□□□□ -2.34
WHI3YNL197C SMC4Q12267 1418 aa0.41□□□□□ -2.34
WHI3YNL197C IRA1P18963 3092 aa0.41□□□□□ -2.34
WHI3YNL197C TY2B-DR3Q07791 1770 aaKnown RBP0.41□□□□□ -2.34
WHI3YNL197C THO2P53552 1597 aaKnown RBP0.41□□□□□ -2.34
WHI3YNL197C RPO31P04051 1460 aa0.41□□□□□ -2.34
WHI3YNL197C SCC2Q04002 1493 aa0.41□□□□□ -2.34
WHI3YNL197C ARO1P08566 1588 aaKnown RBP0.4□□□□□ -2.35
WHI3YNL197C DNF2Q12675 1612 aa0.4□□□□□ -2.35
WHI3YNL197C YOR011W-AQ3E807 68 aa0.39□□□□□ -2.35
WHI3YNL197C TOM1Q03280 3268 aa0.39□□□□□ -2.35
WHI3YNL197C SEN1Q00416 2231 aaKnown RBP0.39□□□□□ -2.35
WHI3YNL197C VPS13Q07878 3144 aa0.38□□□□□ -2.35
WHI3YNL197C SSS1P35179 80 aa0.38□□□□□ -2.35
WHI3YNL197C OLI1P61829 76 aa0.38□□□□□ -2.35
WHI3YNL197C YOR032W-AQ8TGS1 66 aa0.38□□□□□ -2.35
WHI3YNL197C YLR146W-AQ2V2P1 62 aa0.37□□□□□ -2.35
WHI3YNL197C YBR200W-AQ3E755 54 aa0.37□□□□□ -2.35
WHI3YNL197C HUB1Q6Q546 73 aa0.37□□□□□ -2.35
WHI3YNL197C IQG1Q12280 1495 aa0.37□□□□□ -2.35
WHI3YNL197C TCB3Q03640 1545 aaKnown RBP0.37□□□□□ -2.35
WHI3YNL197C BCK1Q01389 1478 aa0.37□□□□□ -2.35
WHI3YNL197C YKL018C-AQ3E7A7 99 aa0.37□□□□□ -2.35
WHI3YNL197C ERI1P62651 68 aaKnown RBP0.36□□□□□ -2.35
WHI3YNL197C HIR3P47171 1648 aa0.36□□□□□ -2.35
WHI3YNL197C RPS27AP35997 82 aaKnown RBP0.36□□□□□ -2.35
WHI3YNL197C YCR108CQ3E819 63 aa0.36□□□□□ -2.35
WHI3YNL197C YOR394C-AQ8TGJ0 55 aa0.36□□□□□ -2.35
WHI3YNL197C VPS15P22219 1454 aa0.35□□□□□ -2.35
WHI3YNL197C YBL039W-BP0C268 59 aa0.35□□□□□ -2.35
WHI3YNL197C YDR182W-AQ3E796 67 aa0.35□□□□□ -2.35
WHI3YNL197C MEC1P38111 2368 aa0.34□□□□□ -2.35
WHI3YNL197C DYN1P36022 4092 aa0.34□□□□□ -2.35
WHI3YNL197C YDR246W-AQ3E763 66 aa0.34□□□□□ -2.36
WHI3YNL197C RPO21P04050 1733 aaKnown RBP0.32□□□□□ -2.36
WHI3YNL197C TY3B-GQ99315 1547 aa0.32□□□□□ -2.36
WHI3YNL197C YSY6P38374 65 aa0.32□□□□□ -2.36
WHI3YNL197C MYO4P32492 1471 aa0.32□□□□□ -2.36
WHI3YNL197C YOR008C-AQ3E7B9 74 aa0.3□□□□□ -2.36
WHI3YNL197C RRP5Q05022 1729 aaKnown RBP0.3□□□□□ -2.36
WHI3YNL197C HAP1P0CE41 1502 aa0.29□□□□□ -2.36
WHI3YNL197C VTH1P40438 1549 aa0.29□□□□□ -2.36
WHI3YNL197C VTH2P40890 1549 aa0.29□□□□□ -2.36
WHI3YNL197C SIP18P50263 79 aa0.29□□□□□ -2.36
WHI3YNL197C YIL102C-AQ2V2P5 75 aa0.29□□□□□ -2.36
WHI3YNL197C FKS3Q04952 1785 aa0.29□□□□□ -2.36
WHI3YNL197C VMR1P38735 1592 aa0.29□□□□□ -2.36
WHI3YNL197C YMR001C-AQ8TGS9 76 aa0.28□□□□□ -2.36
WHI3YNL197C RPS30AP0CX33 63 aaKnown RBP0.28□□□□□ -2.36
WHI3YNL197C RPS30BP0CX34 63 aaKnown RBP0.28□□□□□ -2.36
WHI3YNL197C RPS29AP41057 56 aaKnown RBP0.27□□□□□ -2.37
WHI3YNL197C PDR12Q02785 1511 aa0.24□□□□□ -2.37
WHI3YNL197C YOL131WQ08270 108 aa0.24□□□□□ -2.37
WHI3YNL197C YBR230W-AQ3E762 66 aa0.24□□□□□ -2.37
WHI3YNL197C YCF1P39109 1515 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms