RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TY2B-FP0CX63 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-GR2P0CX64 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-DR2Q03494 1770 aa0.45□□□□□ -2.34
VPS55YJR044C FKS3Q04952 1785 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-OR1Q12113 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-BQ12491 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-OR2Q12501 1770 aa0.45□□□□□ -2.34
VPS55YJR044C SPI1P40092 148 aa0.45□□□□□ -2.34
VPS55YJR044C RPC10P40422 70 aa0.45□□□□□ -2.34
VPS55YJR044C YGR025WP53216 100 aa0.45□□□□□ -2.34
VPS55YJR044C SDH6Q3E785 79 aa0.45□□□□□ -2.34
VPS55YJR044C YOL164W-AQ3E7A5 60 aa0.45□□□□□ -2.34
VPS55YJR044C YGR035W-AQ45U48 73 aa0.45□□□□□ -2.34
VPS55YJR044C UFD4P33202 1483 aa0.45□□□□□ -2.34
VPS55YJR044C SCC2Q04002 1493 aa0.45□□□□□ -2.34
VPS55YJR044C IQG1Q12280 1495 aa0.45□□□□□ -2.34
VPS55YJR044C SNF2P22082 1703 aa0.44□□□□□ -2.34
VPS55YJR044C RRP5Q05022 1729 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C YBR016WP38216 128 aa0.44□□□□□ -2.34
VPS55YJR044C ATX1P38636 73 aa0.44□□□□□ -2.34
VPS55YJR044C YFL041W-AQ3E817 63 aa0.44□□□□□ -2.34
VPS55YJR044C TY2B-DR3Q07791 1770 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C RPO21P04050 1733 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C TCB3Q03640 1545 aaKnown RBP0.43□□□□□ -2.34
VPS55YJR044C VPS15P22219 1454 aa0.43□□□□□ -2.34
VPS55YJR044C PAI3P01094 68 aa0.43□□□□□ -2.34
VPS55YJR044C YDL022C-AP0C5L6 82 aa0.43□□□□□ -2.34
VPS55YJR044C SGF11Q03067 99 aa0.43□□□□□ -2.34
VPS55YJR044C ATP17Q06405 101 aa0.43□□□□□ -2.34
VPS55YJR044C YPR108W-AQ3E7B3 70 aa0.43□□□□□ -2.34
VPS55YJR044C DNF1P32660 1571 aa0.43□□□□□ -2.34
VPS55YJR044C YJR107C-AP0CT86 78 aa0.42□□□□□ -2.34
VPS55YJR044C LSM2P38203 95 aaKnown RBP0.42□□□□□ -2.34
VPS55YJR044C SEN1Q00416 2231 aaKnown RBP0.42□□□□□ -2.34
VPS55YJR044C KOG1P38873 1557 aa0.41□□□□□ -2.34
VPS55YJR044C PAU7P39545 55 aa0.41□□□□□ -2.34
VPS55YJR044C MYO4P32492 1471 aa0.41□□□□□ -2.34
VPS55YJR044C MMS1Q06211 1407 aa0.4□□□□□ -2.34
VPS55YJR044C PDR12Q02785 1511 aa0.4□□□□□ -2.35
VPS55YJR044C SSS1P35179 80 aa0.4□□□□□ -2.35
VPS55YJR044C VMR1P38735 1592 aa0.4□□□□□ -2.35
VPS55YJR044C IRC20Q06554 1556 aa0.4□□□□□ -2.35
VPS55YJR044C SMC4Q12267 1418 aa0.39□□□□□ -2.35
VPS55YJR044C YFR009W-AP0C5M9 85 aa0.39□□□□□ -2.35
VPS55YJR044C YDR182W-AQ3E796 67 aa0.39□□□□□ -2.35
VPS55YJR044C HUB1Q6Q546 73 aa0.39□□□□□ -2.35
VPS55YJR044C DNF2Q12675 1612 aa0.38□□□□□ -2.35
VPS55YJR044C SPO14P36126 1683 aa0.38□□□□□ -2.35
VPS55YJR044C TIM12P32830 109 aa0.38□□□□□ -2.35
VPS55YJR044C YDR246W-AQ3E763 66 aa0.38□□□□□ -2.35
VPS55YJR044C ERI1P62651 68 aaKnown RBP0.37□□□□□ -2.35
VPS55YJR044C YOR011W-AQ3E807 68 aa0.37□□□□□ -2.35
VPS55YJR044C UTP20P35194 2493 aaKnown RBP0.36□□□□□ -2.35
VPS55YJR044C YBL044WP38194 122 aa0.36□□□□□ -2.35
VPS55YJR044C YSY6P38374 65 aa0.36□□□□□ -2.35
VPS55YJR044C TY3B-GQ99315 1547 aa0.36□□□□□ -2.35
VPS55YJR044C RPS27AP35997 82 aaKnown RBP0.35□□□□□ -2.35
VPS55YJR044C OLI1P61829 76 aa0.35□□□□□ -2.35
VPS55YJR044C YIL102C-AQ2V2P5 75 aa0.35□□□□□ -2.35
VPS55YJR044C YBR200W-AQ3E755 54 aa0.35□□□□□ -2.35
VPS55YJR044C YIL134C-AQ45U18 67 aa0.35□□□□□ -2.35
VPS55YJR044C YOR032W-AQ8TGS1 66 aa0.35□□□□□ -2.35
VPS55YJR044C YOR394C-AQ8TGJ0 55 aa0.34□□□□□ -2.36
VPS55YJR044C YBL039W-BP0C268 59 aa0.33□□□□□ -2.36
VPS55YJR044C YLR146W-AQ2V2P1 62 aa0.33□□□□□ -2.36
VPS55YJR044C YKL018C-AQ3E7A7 99 aa0.33□□□□□ -2.36
VPS55YJR044C VMA9Q3E7B6 73 aa0.33□□□□□ -2.36
VPS55YJR044C HAP1P0CE41 1502 aa0.33□□□□□ -2.36
VPS55YJR044C VTH1P40438 1549 aa0.33□□□□□ -2.36
VPS55YJR044C VTH2P40890 1549 aa0.33□□□□□ -2.36
VPS55YJR044C YOL131WQ08270 108 aa0.32□□□□□ -2.36
VPS55YJR044C PDR5P33302 1511 aaKnown RBP0.32□□□□□ -2.36
VPS55YJR044C TY1B-DR4Q07793 1604 aa0.31□□□□□ -2.36
VPS55YJR044C RPS30AP0CX33 63 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C RPS30BP0CX34 63 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C YOL166W-AQ8TGJ1 51 aa0.31□□□□□ -2.36
VPS55YJR044C YCF1P39109 1515 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C YKL023C-AQ2V2P3 75 aa0.3□□□□□ -2.36
VPS55YJR044C YBR230W-AQ3E762 66 aa0.3□□□□□ -2.36
VPS55YJR044C PDR15Q04182 1529 aaKnown RBP0.29□□□□□ -2.36
VPS55YJR044C MON2P48563 1636 aaPredicted RBP0.29□□□□□ -2.36
VPS55YJR044C YFR010W-AP0C5N0 62 aa0.29□□□□□ -2.36
VPS55YJR044C YOR008C-AQ3E7B9 74 aa0.29□□□□□ -2.36
VPS55YJR044C YBT1P32386 1661 aa0.29□□□□□ -2.36
VPS55YJR044C NUP188P52593 1655 aaKnown RBP0.29□□□□□ -2.36
VPS55YJR044C RPS29AP41057 56 aaKnown RBP0.28□□□□□ -2.36
VPS55YJR044C YCR108CQ3E819 63 aa0.28□□□□□ -2.36
VPS55YJR044C YMR001C-AQ8TGS9 76 aa0.28□□□□□ -2.36
VPS55YJR044C TOR1P35169 2470 aa0.28□□□□□ -2.36
VPS55YJR044C SSK2P53599 1579 aa0.28□□□□□ -2.37
VPS55YJR044C TOS6P48560 102 aa0.26□□□□□ -2.37
VPS55YJR044C CDC25P04821 1589 aa0.26□□□□□ -2.37
VPS55YJR044C SPT6P23615 1451 aaKnown RBP0.25□□□□□ -2.37
VPS55YJR044C YLR157W-DP0CE99 70 aa0.25□□□□□ -2.37
VPS55YJR044C RPS27BP38711 82 aa0.25□□□□□ -2.37
VPS55YJR044C SIP18P50263 79 aa0.25□□□□□ -2.37
VPS55YJR044C USO1P25386 1790 aa0.24□□□□□ -2.37
VPS55YJR044C SNQ2P32568 1501 aaKnown RBP0.24□□□□□ -2.37
VPS55YJR044C YDR524C-BQ3E6R4 66 aa0.23□□□□□ -2.37
VPS55YJR044C COA2Q3E823 68 aa0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms