RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TY2B-FP0CX63 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-GR2P0CX64 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-DR2Q03494 1770 aa0.45□□□□□ -2.34
VPS55YJR044C FKS3Q04952 1785 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-OR1Q12113 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-BQ12491 1770 aa0.45□□□□□ -2.34
VPS55YJR044C TY2B-OR2Q12501 1770 aa0.45□□□□□ -2.34
VPS55YJR044C SPI1P40092 148 aa0.45□□□□□ -2.34
VPS55YJR044C RPC10P40422 70 aa0.45□□□□□ -2.34
VPS55YJR044C YGR025WP53216 100 aa0.45□□□□□ -2.34
VPS55YJR044C SDH6Q3E785 79 aa0.45□□□□□ -2.34
VPS55YJR044C YOL164W-AQ3E7A5 60 aa0.45□□□□□ -2.34
VPS55YJR044C YGR035W-AQ45U48 73 aa0.45□□□□□ -2.34
VPS55YJR044C UFD4P33202 1483 aa0.45□□□□□ -2.34
VPS55YJR044C SCC2Q04002 1493 aa0.45□□□□□ -2.34
VPS55YJR044C IQG1Q12280 1495 aa0.45□□□□□ -2.34
VPS55YJR044C SNF2P22082 1703 aa0.44□□□□□ -2.34
VPS55YJR044C RRP5Q05022 1729 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C YBR016WP38216 128 aa0.44□□□□□ -2.34
VPS55YJR044C ATX1P38636 73 aa0.44□□□□□ -2.34
VPS55YJR044C YFL041W-AQ3E817 63 aa0.44□□□□□ -2.34
VPS55YJR044C TY2B-DR3Q07791 1770 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C RPO21P04050 1733 aaKnown RBP0.44□□□□□ -2.34
VPS55YJR044C TCB3Q03640 1545 aaKnown RBP0.43□□□□□ -2.34
VPS55YJR044C VPS15P22219 1454 aa0.43□□□□□ -2.34
VPS55YJR044C PAI3P01094 68 aa0.43□□□□□ -2.34
VPS55YJR044C YDL022C-AP0C5L6 82 aa0.43□□□□□ -2.34
VPS55YJR044C SGF11Q03067 99 aa0.43□□□□□ -2.34
VPS55YJR044C ATP17Q06405 101 aa0.43□□□□□ -2.34
VPS55YJR044C YPR108W-AQ3E7B3 70 aa0.43□□□□□ -2.34
VPS55YJR044C DNF1P32660 1571 aa0.43□□□□□ -2.34
VPS55YJR044C YJR107C-AP0CT86 78 aa0.42□□□□□ -2.34
VPS55YJR044C LSM2P38203 95 aaKnown RBP0.42□□□□□ -2.34
VPS55YJR044C SEN1Q00416 2231 aaKnown RBP0.42□□□□□ -2.34
VPS55YJR044C KOG1P38873 1557 aa0.41□□□□□ -2.34
VPS55YJR044C PAU7P39545 55 aa0.41□□□□□ -2.34
VPS55YJR044C MYO4P32492 1471 aa0.41□□□□□ -2.34
VPS55YJR044C MMS1Q06211 1407 aa0.4□□□□□ -2.34
VPS55YJR044C PDR12Q02785 1511 aa0.4□□□□□ -2.35
VPS55YJR044C SSS1P35179 80 aa0.4□□□□□ -2.35
VPS55YJR044C VMR1P38735 1592 aa0.4□□□□□ -2.35
VPS55YJR044C IRC20Q06554 1556 aa0.4□□□□□ -2.35
VPS55YJR044C SMC4Q12267 1418 aa0.39□□□□□ -2.35
VPS55YJR044C YFR009W-AP0C5M9 85 aa0.39□□□□□ -2.35
VPS55YJR044C YDR182W-AQ3E796 67 aa0.39□□□□□ -2.35
VPS55YJR044C HUB1Q6Q546 73 aa0.39□□□□□ -2.35
VPS55YJR044C DNF2Q12675 1612 aa0.38□□□□□ -2.35
VPS55YJR044C SPO14P36126 1683 aa0.38□□□□□ -2.35
VPS55YJR044C TIM12P32830 109 aa0.38□□□□□ -2.35
VPS55YJR044C YDR246W-AQ3E763 66 aa0.38□□□□□ -2.35
VPS55YJR044C ERI1P62651 68 aaKnown RBP0.37□□□□□ -2.35
VPS55YJR044C YOR011W-AQ3E807 68 aa0.37□□□□□ -2.35
VPS55YJR044C UTP20P35194 2493 aaKnown RBP0.36□□□□□ -2.35
VPS55YJR044C YBL044WP38194 122 aa0.36□□□□□ -2.35
VPS55YJR044C YSY6P38374 65 aa0.36□□□□□ -2.35
VPS55YJR044C TY3B-GQ99315 1547 aa0.36□□□□□ -2.35
VPS55YJR044C RPS27AP35997 82 aaKnown RBP0.35□□□□□ -2.35
VPS55YJR044C OLI1P61829 76 aa0.35□□□□□ -2.35
VPS55YJR044C YIL102C-AQ2V2P5 75 aa0.35□□□□□ -2.35
VPS55YJR044C YBR200W-AQ3E755 54 aa0.35□□□□□ -2.35
VPS55YJR044C YIL134C-AQ45U18 67 aa0.35□□□□□ -2.35
VPS55YJR044C YOR032W-AQ8TGS1 66 aa0.35□□□□□ -2.35
VPS55YJR044C YOR394C-AQ8TGJ0 55 aa0.34□□□□□ -2.36
VPS55YJR044C YBL039W-BP0C268 59 aa0.33□□□□□ -2.36
VPS55YJR044C YLR146W-AQ2V2P1 62 aa0.33□□□□□ -2.36
VPS55YJR044C YKL018C-AQ3E7A7 99 aa0.33□□□□□ -2.36
VPS55YJR044C VMA9Q3E7B6 73 aa0.33□□□□□ -2.36
VPS55YJR044C HAP1P0CE41 1502 aa0.33□□□□□ -2.36
VPS55YJR044C VTH1P40438 1549 aa0.33□□□□□ -2.36
VPS55YJR044C VTH2P40890 1549 aa0.33□□□□□ -2.36
VPS55YJR044C YOL131WQ08270 108 aa0.32□□□□□ -2.36
VPS55YJR044C PDR5P33302 1511 aaKnown RBP0.32□□□□□ -2.36
VPS55YJR044C TY1B-DR4Q07793 1604 aa0.31□□□□□ -2.36
VPS55YJR044C RPS30AP0CX33 63 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C RPS30BP0CX34 63 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C YOL166W-AQ8TGJ1 51 aa0.31□□□□□ -2.36
VPS55YJR044C YCF1P39109 1515 aaKnown RBP0.31□□□□□ -2.36
VPS55YJR044C YKL023C-AQ2V2P3 75 aa0.3□□□□□ -2.36
VPS55YJR044C YBR230W-AQ3E762 66 aa0.3□□□□□ -2.36
VPS55YJR044C PDR15Q04182 1529 aaKnown RBP0.29□□□□□ -2.36
VPS55YJR044C MON2P48563 1636 aaPredicted RBP0.29□□□□□ -2.36
VPS55YJR044C YFR010W-AP0C5N0 62 aa0.29□□□□□ -2.36
VPS55YJR044C YOR008C-AQ3E7B9 74 aa0.29□□□□□ -2.36
VPS55YJR044C YBT1P32386 1661 aa0.29□□□□□ -2.36
VPS55YJR044C NUP188P52593 1655 aaKnown RBP0.29□□□□□ -2.36
VPS55YJR044C RPS29AP41057 56 aaKnown RBP0.28□□□□□ -2.36
VPS55YJR044C YCR108CQ3E819 63 aa0.28□□□□□ -2.36
VPS55YJR044C YMR001C-AQ8TGS9 76 aa0.28□□□□□ -2.36
VPS55YJR044C TOR1P35169 2470 aa0.28□□□□□ -2.36
VPS55YJR044C SSK2P53599 1579 aa0.28□□□□□ -2.37
VPS55YJR044C TOS6P48560 102 aa0.26□□□□□ -2.37
VPS55YJR044C CDC25P04821 1589 aa0.26□□□□□ -2.37
VPS55YJR044C SPT6P23615 1451 aaKnown RBP0.25□□□□□ -2.37
VPS55YJR044C YLR157W-DP0CE99 70 aa0.25□□□□□ -2.37
VPS55YJR044C RPS27BP38711 82 aa0.25□□□□□ -2.37
VPS55YJR044C SIP18P50263 79 aa0.25□□□□□ -2.37
VPS55YJR044C USO1P25386 1790 aa0.24□□□□□ -2.37
VPS55YJR044C SNQ2P32568 1501 aaKnown RBP0.24□□□□□ -2.37
VPS55YJR044C YDR524C-BQ3E6R4 66 aa0.23□□□□□ -2.37
VPS55YJR044C COA2Q3E823 68 aa0.22□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms