RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 INCA1Q0VD86 236 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 PNOCQ13519 176 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 SNX30Q5VWJ9 437 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 UNC93AQ86WB7 457 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 FMR1NBQ8N0W7 255 aaPredicted RBP23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 PDZD8Q8NEN9 1154 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 OVCA2Q8WZ82 227 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 EEF2KMTQ96G04 330 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 FAM49BQ9NUQ9 324 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 CFAP97Q9P2B7 532 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 CHORDC1Q9UHD1 332 aaPredicted RBP23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 GMEB2Q9UKD1 530 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 RAB23Q9ULC3 237 aa23.56■■□□□ 1.36
NEDD4L-237ENST00000617539 SPAG17Q6Q759 2223 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 ATG13O75143 517 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 ZDHHC11BP0C7U3 371 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 ENPEPQ07075 957 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 FBXO43Q4G163 708 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 ADGRG2Q8IZP9 1017 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 GPR161Q8N6U8 529 aaKnown RBP23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 KIAA1958Q8N8K9 716 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 RPLP0P6Q8NHW5 317 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 CCSER2Q9H7U1 834 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 GMIPQ9P107 970 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 RALGAPA1Q6GYQ0 2036 aa23.55■■□□□ 1.36
NEDD4L-237ENST00000617539 LAMA1P25391 3075 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 MBL2P11226 248 aaPredicted RBP23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 RPL13P26373 211 aaKnown RBP23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 PSMC2P35998 433 aaKnown RBP23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 SPEM2Q0P670 501 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 MESP2Q0VG99 397 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 NR1H3Q13133 447 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 ADAM9Q13443 819 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 RSPO4Q2I0M5 234 aaPredicted RBP23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 EDRF1Q3B7T1 1238 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 GPRIN1Q7Z2K8 1008 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 WHAMMQ8TF30 809 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 MMRN2Q9H8L6 949 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 SLC8A2Q9UPR5 921 aa23.54■■□□□ 1.36
NEDD4L-237ENST00000617539 RETP07949 1114 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 KRT13P13646 458 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 MAP3K7CLP57077 242 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 FOXK2Q01167 660 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 FAM160A2Q8N612 972 aaPredicted RBP23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 ENGASEQ8NFI3 743 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 SEMA4DQ92854 862 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 WBP2Q969T9 261 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 HHIPQ96QV1 700 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 NIF3L1Q9GZT8 377 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 TMEM8AQ9HCN3 771 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 USP18Q9UMW8 372 aa23.53■■□□□ 1.36
NEDD4L-237ENST00000617539 CCDC163A0A0D9SF12 145 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 HHLA1C9JL84 531 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 K7EQS6 105 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 CHRM1P11229 460 aaPredicted RBP23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 ADORA2BP29275 332 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 PUM1Q14671 1186 aaKnown RBP eCLIP23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 DHCR24Q15392 516 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 HECTD3Q5T447 861 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 RHBDF2Q6PJF5 856 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 SYT13Q7L8C5 426 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 SFTPA1Q8IWL2 248 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 GAB3Q8WWW8 586 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 EXOC4Q96A65 974 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 COMMD8Q9NX08 183 aa23.52■■□□□ 1.36
NEDD4L-237ENST00000617539 CILPO75339 1184 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 PRCPP42785 496 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 TUBP50607 506 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 LMNB2Q03252 620 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 CLEC20AQ6ZU45 233 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 C12orf40Q86WS4 652 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 DDX42Q86XP3 938 aaKnown RBP eCLIP23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 ERCC4Q92889 916 aaPredicted RBP23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 HNRNPABQ99729 332 aaKnown RBP23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 IMPG2Q9BZV3 1241 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 CYP3A43Q9HB55 503 aa23.51■■□□□ 1.35
NEDD4L-237ENST00000617539 E2F8A0AVK6 867 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 SLC9A3R1O14745 358 aaPredicted RBP23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 FAM200BP0CF97 657 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 CD58P19256 250 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 SLC6A11P48066 632 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 DMC1Q14565 340 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 CEP68Q76N32 757 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 DGLUCYQ7Z3D6 616 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 CAMKK1Q8N5S9 505 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 USP33Q8TEY7 942 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 NT5C1AQ9BXI3 368 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 OSER1Q9NX31 292 aa23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.5■■□□□ 1.35
NEDD4L-237ENST00000617539 LRP3O75074 770 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 RPP40O75818 363 aaKnown RBP23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 GTF2H1P32780 548 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 PMS1P54277 932 aaKnown RBP23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 SEC13P55735 322 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 KRT39Q6A163 491 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 KBTBD6Q86V97 674 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 SPATA20Q8TB22 786 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 JAKMIP2Q96AA8 810 aa23.49■■□□□ 1.35
NEDD4L-237ENST00000617539 CYFIP2Q96F07 1278 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms