RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SHOC2Q9UQ13 582 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 ZC3H11AO75152 810 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 ZWINTO95229 277 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NAMPTP43490 491 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NEK3P51956 506 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 BCAR1P56945 870 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 LAMTOR4Q0VGL1 99 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 BST1Q10588 318 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 CA9Q16790 459 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 C1orf146Q5VVC0 180 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NIPA1Q7RTP0 329 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 FBXO16Q8IX29 292 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 SCUBE3Q8IX30 993 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 DEPDC1BQ8WUY9 529 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NDRG1Q92597 394 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 NSL1Q96IY1 281 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 SYT15Q9BQS2 421 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 DHX35Q9H5Z1 703 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 AKT3Q9Y243 479 aa9.34□□□□□ -0.91
HDGFL3-206ENST00000568294 MICAL2O94851 1124 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 VTNP04004 478 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PDGFRBP09619 1106 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 KCNA3P22001 575 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC25A3Q00325 362 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TCEAL1Q15170 157 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 VWA5B1Q5TIE3 1220 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 DENND5BQ6ZUT9 1274 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 DEFB132Q7Z7B7 95 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PPFIBP2Q8ND30 876 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 DCAKDQ8WVC6 231 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PYDC1Q8WXC3 89 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PGBD4Q96DM1 585 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 NTPCRQ9BSD7 190 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 MFHAS1Q9Y4C4 1052 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PRPF4O43172 522 aaKnown RBP eCLIP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 CCDC22O60826 627 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 USP12O75317 370 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TBX10O75333 385 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 AP1G2O75843 785 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SMNDC1O75940 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 LDHAP00338 332 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 KRT7P08729 469 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 LINGO3P0C6S8 592 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 GNAT1P11488 350 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ETS2P15036 469 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TFE3P19532 575 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ADORA2BP29275 332 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 MSX2P35548 267 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TTLL12Q14166 644 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 C4orf50Q6ZRC1 276 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 RGS9BPQ6ZS82 235 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 BRSK2Q8IWQ3 736 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 FAM149B1Q96BN6 582 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 CLMNQ96JQ2 1002 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ACSS3Q9H6R3 686 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 MINDY3Q9H8M7 445 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 STK32BQ9NY57 414 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 EURLQ9NYK6 297 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 GOLGA8TH3BQL2 631 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 KIF1CO43896 1103 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ADCY3O60266 1144 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ABHD2P08910 425 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ALADP13716 330 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 LCP1P13796 627 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SNRPFP62306 86 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ATF7IP2Q5U623 682 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 ACOT1Q86TX2 421 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TREML1Q86YW5 311 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TEX9Q8N6V9 391 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 NAT8LQ8N9F0 302 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 CCNYQ8ND76 341 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC35B2Q8TB61 432 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 OXNAD1Q96HP4 312 aaPredicted RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 GMLQ99445 158 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TSC22D3Q99576 134 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 BTBD10Q9BSF8 475 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 VPS11Q9H270 941 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 DDX56Q9NY93 547 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 TAS2R1Q9NYW7 299 aa9.33□□□□□ -0.92
HDGFL3-206ENST00000568294 PRR5-ARHGAP8B1AHC4 643 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 NEMP1O14524 444 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 GSC2O15499 205 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 ITGAVP06756 1048 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC8A3P57103 927 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 FKBP1AP62942 108 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 ARHGAP8P85298 464 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC25A11Q02978 314 aaKnown RBP9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 KLC1Q07866 573 aa9.32□□□□□ -0.92
HDGFL3-206ENST00000568294 TREML2Q5T2D2 321 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms