RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CXCL12P48061 93 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SOX9P48436 509 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 IFNAR2P48551 515 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CCR3P51677 355 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CACNA2D1P54289 1103 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 STX17P56962 302 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SLC7A9P82251 487 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 GRSF1Q12849 480 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 MTAPQ13126 283 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 ZNF77Q15935 545 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 FILIP1Q7Z7B0 1213 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 DDX42Q86XP3 938 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 MAML2Q8IZL2 1156 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 FUKQ8N0W3 1084 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SPEM1Q8N4L4 309 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CPA6Q8N4T0 437 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 FBXO32Q969P5 355 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 ELMO3Q96BJ8 720 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CYFIP2Q96F07 1278 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CEP63Q96MT8 703 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SLC22A12Q96S37 553 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 HNRNPABQ99729 332 aaKnown RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 EBF3Q9H4W6 596 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 APOBEC3GQ9HC16 384 aaKnown RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CSNK1G1Q9HCP0 422 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SPTLC3Q9NUV7 552 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 ZSCAN32Q9NX65 697 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 IL37Q9NZH6 218 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CHORDC1Q9UHD1 332 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 PCDHGA2Q9Y5H1 932 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SCN1AP35498 2009 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TRIM49BA6NDI0 452 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 PRR23AA6NEV1 266 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 BECN2A8MW95 431 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 GOLGA6L19H0YKK7 550 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TNFRSF10BO14763 440 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 CILPO75339 1184 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 CD58P19256 250 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TUBP50607 506 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 ZNF75DP51815 510 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 SLC5A3P53794 718 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 CETN1Q12798 172 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 IFRD2Q12894 506 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-221ENST00000531068 USP4Q13107 963 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 PON2Q15165 354 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-221ENST00000531068 HECTD3Q5T447 861 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TXNDC11Q6PKC3 985 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 C12orf29Q8N999 325 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 CCDC26Q8TAB7 109 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
CAPN1-221ENST00000531068 SMOQ99835 787 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 RNF38Q9H0F5 515 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 ECT2Q9H8V3 914 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 HPS4Q9NQG7 708 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.62□□□□□ -0.552e-14■■■■■ 49.7
CAPN1-221ENST00000531068 KRT82Q9NSB4 513 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 FAM49BQ9NUQ9 324 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 TMEM30AQ9NV96 361 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 COQ4Q9Y3A0 265 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
CAPN1-221ENST00000531068 R4GN57 208 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 DOCK8Q8NF50 2099 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 PIEZO1Q92508 2521 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 NOTCH4Q99466 2003 aa11.62□□□□□ -0.55
CAPN1-221ENST00000531068 PDCD11Q14690 1871 aaKnown RBP11.61□□□□□ -0.55
CAPN1-221ENST00000531068 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 LEFTY2O00292 366 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 ATG13O75143 517 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 NFATC1O95644 943 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 GNA14O95837 355 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 OLFM2O95897 454 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 OAS1P00973 400 aaKnown RBP11.61□□□□□ -0.55
CAPN1-221ENST00000531068 MBL2P11226 248 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-221ENST00000531068 CCDC130P13994 396 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 ARSAP15289 507 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 DRD1P21728 446 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 ADORA2BP29275 332 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 SLC8A3P57103 927 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
CAPN1-221ENST00000531068 ORC1Q13415 861 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 CCDC40Q4G0X9 1142 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 FBXO43Q4G163 708 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 TMEM196Q5HYL7 178 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 SCAMP5Q8TAC9 235 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 WHAMMQ8TF30 809 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 SEMA4DQ92854 862 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 TMEM176AQ96HP8 235 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 P2RY13Q9BPV8 354 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 NACA2Q9H009 215 aa11.61□□□□□ -0.55
CAPN1-221ENST00000531068 PNPLA8Q9NP80 782 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms