RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	GRIK1	P39086	918 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	GRM5	P41594	1212 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	LIFR	P42702	1097 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	GPR15	P49685	360 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TPMT	P51580	245 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	RPL10A	P62906	217 aa	Known RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	NUCB1	Q02818	461 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	GAD2	Q05329	585 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	PPP2R5C	Q13362	524 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TBR1	Q16650	682 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ATF7IP2	Q5U623	682 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	SDHAF4	Q5VUM1	108 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	BTBD8	Q5XKL5	378 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	SYNE3	Q6ZMZ3	975 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	METTL3	Q86U44	580 aa	Known RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	FAM124A	Q86V42	546 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TPH2	Q8IWU9	490 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TERB1	Q8NA31	727 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ETNPPL	Q8TBG4	499 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	SPPL2B	Q8TCT7	592 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TBCK	Q8TEA7	893 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	CCDC12	Q8WUD4	166 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	DYDC2	Q96IM9	177 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	SLC46A1	Q96NT5	459 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	NACC1	Q96RE7	527 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	NUP58	Q9BVL2	599 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	C2orf40	Q9H1Z8	148 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ZSWIM4	Q9H7M6	989 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	RPF1	Q9H9Y2	349 aa	Known RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	OSGEP	Q9NPF4	335 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	RBM28	Q9NW13	759 aa	Known RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	GCNT4	Q9P109	453 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	DEC1	Q9P2X7	70 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	UXT	Q9UBK9	157 aa	Predicted RBP	5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	TUBGCP4	Q9UGJ1	667 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ANAPC2	Q9UJX6	822 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	SATB2	Q9UPW6	733 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	STARD13	Q9Y3M8	1113 aa		5.8	□□□□□ -1.48
SEC13-219	ENST00000492602	ABCA2	Q9BZC7	2435 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CELSR2	Q9HCU4	2923 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TRIP11	Q15643	1979 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	SLC9A3R1	O14745	358 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TRIM24	O15164	1050 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TRAK2	O60296	914 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	USO1	O60763	962 aa	Known RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	RNF224	P0DH78	156 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ACADM	P11310	421 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TYMP	P19971	482 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ACP1	P24666	158 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	MCM5	P33992	734 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ASIC1	P78348	528 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	FUT2	Q10981	343 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	BNIP3	Q12983	259 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	SRSF6	Q13247	344 aa	Known RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ORC1	Q13415	861 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	STARD3	Q14849	445 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CLCA4	Q14CN2	919 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	EPHA7	Q15375	998 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	SHB	Q15464	509 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	RTN1	Q16799	776 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	PFKFB3	Q16875	520 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	FUT11	Q495W5	492 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	LY6G5C	Q5SRR4	150 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	C1QL3	Q5VWW1	255 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	NCAPH2	Q6IBW4	605 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	FOXR1	Q6PIV2	292 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CACUL1	Q86Y37	369 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TMPRSS6	Q8IU80	811 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	FSIP1	Q8NA03	581 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	BICD2	Q8TD16	824 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	C2orf15	Q8WU43	125 aa	Known RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	SIPA1	Q96FS4	1042 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	MTA3	Q9BTC8	594 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ACE2	Q9BYF1	805 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	LRRC2	Q9BYS8	371 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	MKRN2	Q9H000	416 aa	Known RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CCDC113	Q9H0I3	377 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ZCWPW1	Q9H0M4	648 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	OSBPL3	Q9H4L5	887 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	TTC12	Q9H892	705 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CNTN3	Q9P232	1028 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	VAV3	Q9UKW4	847 aa		5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.79	□□□□□ -1.48
SEC13-219	ENST00000492602	CYP3A7-CYP3A51P	A0A087WV96	503 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602		A0A087X0B3	334 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CYP26A1	O43174	497 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	MTSS1	O43312	755 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	PRPF40A	O75400	957 aa	Known RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	FSBP	O95073	299 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ODC1	P11926	461 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	HARS	P12081	509 aa	Known RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	CYP3A7	P24462	503 aa		5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	EPHA8	P29322	1005 aa	Predicted RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	ARRB1	P49407	418 aa	Predicted RBP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	AARS	P49588	968 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
SEC13-219	ENST00000492602	RARRES1	P49788	294 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms