RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 CUL3Q13618 768 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 SNX17Q15036 470 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 ARHGEF6Q15052 776 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 UBAP2Q5T6F2 1119 aaKnown RBP14.85□□□□□ -0.03
RPL13A-212ENST00000488946 CROCCP2Q86T23 111 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 SNF8Q96H20 258 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 NT5C1AQ9BXI3 368 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 AP5M1Q9H0R1 490 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 SEMA4AQ9H3S1 761 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 KLHL11Q9NVR0 708 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 GINS2Q9Y248 185 aa14.85□□□□□ -0.03
RPL13A-212ENST00000488946 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 CFAP73A6NFT4 308 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 LRCH4O75427 683 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 ITIH2P19823 946 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 CYP2B6P20813 491 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 PSMA2P25787 234 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 YARSP54577 528 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 CALCOCO2Q13137 446 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TXNRD3NBQ6F5E7 133 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 BEST2Q8NFU1 509 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TMEM40Q8WWA1 233 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TSPAN18Q96SJ8 248 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TMEM109Q9BVC6 243 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 MMADHCQ9H3L0 296 aaPredicted RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 NXF3Q9H4D5 531 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 METTL5Q9NRN9 209 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TUBGCP4Q9UGJ1 667 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TRIP12Q14669 1992 aaPredicted RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 C3orf70A6NLC5 250 aaPredicted RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 PI4K2BG5E9Z4 385 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TREHO43280 583 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 DIAPH2O60879 1101 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 RECQL4O94761 1208 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TJP3O95049 919 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 VIMP08670 466 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 RARGP13631 454 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 CDKN2BP42772 138 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TAZQ16635 292 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 FAM133BQ5BKY9 247 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 XKR4Q5GH76 650 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TNFAIP8L3Q5GJ75 292 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 ARMCX6Q7L4S7 300 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 TBC1D1Q86TI0 1168 aaPredicted RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 ARFGAP1Q8N6T3 406 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 EPS8L3Q8TE67 593 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 PPP1R13LQ8WUF5 828 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 HEXIM2Q96MH2 286 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 NSRP1Q9H0G5 558 aaKnown RBP14.84□□□□□ -0.03
RPL13A-212ENST00000488946 ZCWPW1Q9H0M4 648 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 ASIC3Q9UHC3 531 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 EFR3BQ9Y2G0 817 aa14.84□□□□□ -0.03
RPL13A-212ENST00000488946 PPEF2O14830 753 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 LIASO43766 372 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 MYL3P08590 195 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 CAV1Q03135 178 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 ACAP1Q15027 740 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 UBXN11Q5T124 520 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 CD99L2Q8TCZ2 262 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 SYNCQ9H7C4 482 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 TMEM165Q9HC07 324 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 AAASQ9NRG9 546 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 ABCF3Q9NUQ8 709 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 TSPAN16Q9UKR8 245 aa14.83□□□□□ -0.03
RPL13A-212ENST00000488946 UBQLN1Q9UMX0 589 aaKnown RBP14.83□□□□□ -0.03
RPL13A-212ENST00000488946 PFKMP08237 780 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 KRT7P08729 469 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 ATF2P15336 505 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 IFNAR2P48551 515 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 CRYBB1P53674 252 aaPredicted RBP14.83□□□□□ -0.04
RPL13A-212ENST00000488946 BEX3Q00994 111 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 FSCN1Q16658 493 aaKnown RBP14.83□□□□□ -0.04
RPL13A-212ENST00000488946 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 PKDCCQ504Y2 493 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 TFDP3Q5H9I0 405 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 TRIM42Q8IWZ5 723 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 AGAP11Q8TF27 550 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 OSBPL1AQ9BXW6 950 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 TRIM4Q9C037 500 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 MIS12Q9H081 205 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
RPL13A-212ENST00000488946 HES2Q9Y543 173 aa14.83□□□□□ -0.04
RPL13A-212ENST00000488946 C17orf102A2RUQ5 167 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 RIPK2O43353 540 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 SNX3O60493 162 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 KRT10P13645 584 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 KCNE1P15382 129 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 KLRC2P26717 231 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 SLCO1A2P46721 670 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 PURAQ00577 322 aaKnown RBP14.82□□□□□ -0.04
RPL13A-212ENST00000488946 LMNB2Q03252 620 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 C9orf57Q5W0N0 161 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 UNC93AQ86WB7 457 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 NME8Q8N427 588 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 CCDC89Q8N998 374 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 BBOF1Q8ND07 529 aa14.82□□□□□ -0.04
RPL13A-212ENST00000488946 UHMK1Q8TAS1 419 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms