RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 COL4A2P08572 1712 aa6.44□□□□□ -1.38
SMARCC1-204ENST00000462198 CNTNAP2Q9UHC6 1331 aa6.44□□□□□ -1.38
SMARCC1-204ENST00000462198 GOLGA4Q13439 2230 aaKnown RBP6.44□□□□□ -1.38
SMARCC1-204ENST00000462198 ADAMTS9Q9P2N4 1935 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 NPHP3-ACAD11A0A0J9YXS1 232 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CCDC189A1A4V9 331 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 LRRIQ4A6NIV6 560 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 SLC38A8A6NNN8 435 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CCDC169A6NNP5 214 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 SMTNL1A8MU46 457 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ADAM12O43184 909 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 HIP1RO75146 1068 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TBCAO75347 108 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TADA2AO75478 443 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 POU2F2P09086 479 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 SFPQP23246 707 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 HSD3B2P26439 372 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ARL2P36404 184 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 VIPR2P41587 438 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 NDUFA8P51970 172 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TPM4P67936 248 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 AMPD3Q01432 767 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 DSC1Q08554 894 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 SEMA3BQ13214 749 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 DMP1Q13316 513 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 PON2Q15165 354 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZRSR2Q15696 482 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZNF423Q2M1K9 1284 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZNF385CQ66K41 422 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 PKN3Q6P5Z2 889 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TXNDC11Q6PKC3 985 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 RBM43Q6ZSC3 357 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 DYMQ7RTS9 669 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CATSPER4Q7RTX7 472 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZNF410Q86VK4 478 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CEP57Q86XR8 500 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 FMNL3Q8IVF7 1028 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 MFSD6LQ8IWD5 586 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CAMKK1Q8N5S9 505 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 RNF149Q8NC42 400 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZNF397Q8NF99 534 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TTC8Q8TAM2 541 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 DEPTORQ8TB45 409 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 LNX1Q8TBB1 728 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ASAP3Q8TDY4 903 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 LRRC15Q8TF66 581 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 RABGGTAQ92696 567 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CCDC74AQ96AQ1 378 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 MSANTD3Q96H12 275 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 CCDC34Q96HJ3 373 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 IFT74Q96LB3 600 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 ZSWIM3Q96MP5 696 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 REEP2Q9BRK0 252 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 BRINP2Q9C0B6 783 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 TNMDQ9H2S6 317 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 MAGEF1Q9HAY2 307 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 POLD4Q9HCU8 107 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 AVENQ9NQS1 362 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 DMGDHQ9UI17 866 aaKnown RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 PYCARDQ9ULZ3 195 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 HPSEQ9Y251 543 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 KIF26AQ9ULI4 1882 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-204ENST00000462198 VWA8A3KMH1 1905 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 PTPRBP23467 1997 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 FAM237AA0A1B0GTK4 181 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 MYBPHLA2RUH7 354 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ARL5CA6NH57 179 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 UPK3BL1B0FP48 263 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 UPK3BL2E5RIL1 263 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 SPECC1L-ADORA2AF8WAN1 911 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 INO80B-WBP1J3KQ70 363 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ARNTLO00327 626 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ATG13O75143 517 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 COQ9O75208 318 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ERLIN2O94905 339 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ZNF202O95125 648 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 IVLP07476 585 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ITGA4P13612 1032 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 IDEP14735 1019 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 TIMP2P16035 220 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 GLRA2P23416 452 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 GBP1P32455 592 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 NAMPTP43490 491 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 AFMP43652 599 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 PEX3P56589 373 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 CENPCQ03188 943 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 FAM160A1Q05DH4 1040 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 LMAN2Q12907 356 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 CAPSQ13938 189 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 CCINQ13939 588 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ARSHQ5FYA8 562 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 RTP2Q5QGT7 225 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 RTL10Q7L3V2 364 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 SRGAP1Q7Z6B7 1085 aa6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 RALGPS2Q86X27 583 aaPredicted RBP6.42□□□□□ -1.38
SMARCC1-204ENST00000462198 ZBTB8OSQ8IWT0 167 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms