RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MED7O43513 233 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 OAS1P00973 400 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 CLCN5P51795 746 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 KPNA1P52294 538 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZNF132P52740 706 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 STARD6P59095 220 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 APBA1Q02410 837 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 PDE4CQ08493 712 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 MTF1Q14872 753 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 CNGA2Q16280 664 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 SKOR2Q2VWA4 1001 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 FKBP15Q5T1M5 1219 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 IER5LQ5T953 404 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 LCLAT1Q6UWP7 414 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 TPRG1Q6ZUI0 275 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 TTC30AQ86WT1 665 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 TFAP2BQ92481 460 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZFYVE19Q96K21 471 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 LRRC3BQ96PB8 259 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 RNF38Q9H0F5 515 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 LRRC4Q9HBW1 653 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 SIX2Q9NPC8 291 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 TRPV5Q9NQA5 729 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 HEBP1Q9NRV9 189 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 GKN1Q9NS71 199 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 DNAJC12Q9UKB3 198 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARHGAP26Q9UNA1 814 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 HCN4Q9Y3Q4 1203 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 CPQQ9Y646 472 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 SYCE3A1L190 88 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 BECN2A8MW95 431 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 LEFTY2O00292 366 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 MAN2B1O00754 1011 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 CYP26A1O43174 497 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 THAP12O43422 761 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 TLR5O60602 858 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 CALCAP01258 141 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 RALAP11233 206 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 COL9A1P20849 921 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 AVPR2P30518 371 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 GNA15P30679 374 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 IFNAR2P48551 515 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 PSEN1P49768 467 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 TUBP50607 506 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 COPB1P53618 953 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 VCPP55072 806 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 SLC7A9P82251 487 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 USP4Q13107 963 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZNF77Q15935 545 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 CWF19L1Q69YN2 538 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZNF852Q6ZMS4 543 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 CCDC186Q7Z3E2 898 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 TADA2BQ86TJ2 420 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 DDX42Q86XP3 938 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 SIX6OS1Q8N1H7 587 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARHGAP18Q8N392 663 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 C8orf33Q9H7E9 229 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 CCSER2Q9H7U1 834 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 DUS2Q9NX74 493 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 LIMA1Q9UHB6 759 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 NAGPAQ9UK23 515 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.15□□□□□ -0.626e-6■■■■■ 55.1
TRAPPC12-213ENST00000461577 MRPS17Q9Y2R5 130 aaKnown RBP11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 PIAS3Q9Y6X2 628 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
TRAPPC12-213ENST00000461577 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.63
TRAPPC12-213ENST00000461577 A0A1W2PQH9 124 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 TULP2O00295 520 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 COCHO43405 550 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 OLFM2O95897 454 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 RARGP13631 454 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 LCP1P13796 627 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 GLULP15104 373 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 TCF3P15923 654 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 AOC1P19801 751 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 RGS7P49802 495 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZNF165P49910 485 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 TKTL1P51854 596 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 UBXN2BQ14CS0 331 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 NCAPHQ15003 741 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 PDGFRLQ15198 375 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 ITPRIPL2Q3MIP1 535 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 RAB41Q5JT25 222 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms