RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 DPYDQ12882 1025 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 BCL2L14Q9BZR8 327 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 COMMD8Q9NX08 183 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 GALNT8Q9NY28 637 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 ITGB3P05106 788 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 CYP2B6P20813 491 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 GRK4P32298 578 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 PEX5P50542 639 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 OXCT1P55809 520 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 GRIK3Q13003 919 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 RCN1Q15293 331 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 DDR2Q16832 855 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 CLPBQ9H078 707 aa12.71□□□□□ -0.37
CACNA1C-219ENST00000399649 A0A1W2PQJ5 194 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 HBP1O60381 514 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SNX30Q5VWJ9 437 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 FAM111AQ96PZ2 611 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 CHP1Q99653 195 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 PACSIN1Q9BY11 444 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 TRIM9Q9C026 710 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SLITRK2Q9H156 845 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SLC40A1Q9NP59 571 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 PHTF1Q9UMS5 762 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SNX13Q9Y5W8 968 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 A0A1B0GTH6 734 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SLC25A27O95847 323 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 STX4Q12846 297 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 TRAF2Q12933 501 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SLC25A24Q6NUK1 477 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 TMEM26Q6ZUK4 368 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 CLYBLQ8N0X4 340 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 SLC20A1Q8WUM9 679 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 RPRD1AQ96P16 312 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 COQ7Q99807 217 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 WDR41Q9HAD4 459 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 MIEF1Q9NQG6 463 aa12.71□□□□□ -0.38
CACNA1C-219ENST00000399649 ZNF839A8K0R7 811 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 TFRCP02786 760 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 TRIM32Q13049 653 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 TRPC4Q9UBN4 977 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CDK12Q9NYV4 1490 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CRTAMO95727 393 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 FCGR1AP12314 374 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 NOS3P29474 1203 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 PPP2R1BP30154 601 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CCNG1P51959 295 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 KIFC1Q9BW19 673 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 KLHL28Q9NXS3 571 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 GPRC5DQ9NZD1 345 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 PSMD14O00487 310 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 TIMM44O43615 452 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 MTRF1O75570 445 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 RBP3P10745 1247 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ITGALP20701 1170 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ZIM3Q96PE6 472 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CELF4Q9BZC1 486 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 DRG1Q9Y295 367 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CYP27B1O15528 508 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CYP7B1O75881 506 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 MUTP22033 750 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 CCNJLQ8IV13 435 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
CACNA1C-219ENST00000399649 SMIM22K7EJ46 135 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 TBC1D12O60347 775 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 DSG3P32926 999 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 HALP42357 657 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 SEL1L3Q68CR1 1132 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 RNF180Q86T96 592 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 METTL16Q86W50 562 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 CACTIN-AS1Q8N1I8 211 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 USP7Q93009 1102 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 PHF20Q9BVI0 1012 aa12.69□□□□□ -0.38
CACNA1C-219ENST00000399649 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms