RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 UBXN11Q5T124 520 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 LHX8Q68G74 356 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 BBS12Q6ZW61 710 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 SRRM1Q8IYB3 904 aaKnown RBP15.72■□□□□ 0.11
TPM3-208ENST00000341485 ANKS4BQ8N8V4 417 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 ACTL9Q8TC94 416 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 CKAP2Q8WWK9 683 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 MAML1Q92585 1016 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 SYNCQ9H7C4 482 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 C10orf88Q9H8K7 445 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 VRTNQ9H8Y1 702 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 ST3GAL5Q9UNP4 418 aa15.72■□□□□ 0.11
TPM3-208ENST00000341485 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM3-208ENST00000341485 CST8O60676 142 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 ATP2C2O75185 946 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 OAS1P00973 400 aaKnown RBP15.71■□□□□ 0.11
TPM3-208ENST00000341485 CD48P09326 243 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 HNRNPH1P31943 449 aaKnown RBP15.71■□□□□ 0.11
TPM3-208ENST00000341485 GABRB2P47870 512 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 SCTRP47872 440 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 RBP5P82980 135 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 MGAT3Q09327 533 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 PTK7Q13308 1070 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 TMED2Q15363 201 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 TAX1BP1Q86VP1 789 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 RIBC1Q8N443 379 aaPredicted RBP15.71■□□□□ 0.11
TPM3-208ENST00000341485 ARRDC4Q8NCT1 418 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 BEST2Q8NFU1 509 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 GDAP1Q8TB36 358 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 SH3TC2Q8TF17 1288 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 PRCCQ92733 491 aaPredicted RBP15.71■□□□□ 0.11
TPM3-208ENST00000341485 MCRS1Q96EZ8 462 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 TTC25Q96NG3 672 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 CYP3A43Q9HB55 503 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
TPM3-208ENST00000341485 SHOC2Q9UQ13 582 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 ACTL7BQ9Y614 415 aa15.71■□□□□ 0.11
TPM3-208ENST00000341485 M0QYV0 167 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 SNX3O60493 162 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 P4HA1P13674 534 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 GDF10P55107 478 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 HPDLQ96IR7 371 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.71■□□□□ 0.1
TPM3-208ENST00000341485 STARD7Q9NQZ5 370 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 FGFR1OP2Q9NVK5 253 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 PCSK1NQ9UHG2 260 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 IPPQ9Y573 584 aa15.71■□□□□ 0.1
TPM3-208ENST00000341485 EXOC1LA0A1B0GW35 172 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 GPR182O15218 404 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 ALOX15BO15296 676 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 CYP3A5P20815 502 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 MIPP30301 263 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 GPD2P43304 727 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 MYO1EQ12965 1108 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 TAF5Q15542 800 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 GLRA4Q5JXX5 417 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 KLK14Q9P0G3 267 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 CNTN3Q9P232 1028 aa15.7■□□□□ 0.1
TPM3-208ENST00000341485 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
TPM3-208ENST00000341485 FRMPD3Q5JV73 1810 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 A0A1W2PQ45 241 aaPredicted RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 A0A1W2PQY0 241 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 VDRP11473 427 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 GAD2Q05329 585 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 ADCY1Q08828 1119 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 TDRPQ86YL5 185 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 TTC13Q8NBP0 860 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 UBA3Q8TBC4 463 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 HEXIM2Q96MH2 286 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 ZMAT2Q96NC0 199 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 FRMD8P1Q9BZ68 369 aaPredicted RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 CXCL16Q9H2A7 254 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 CHST12Q9NRB3 414 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 RASA4BC9J798 803 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 RASA4O43374 803 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 XPOTO43592 962 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 BANF1O75531 89 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 RASSF9O75901 435 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 CTCFP49711 727 aaPredicted RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 PDIA2Q13087 525 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 ANKRD22Q5VYY1 191 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 ALKAL1Q6UXT8 129 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 CAPN12Q6ZSI9 719 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 CENPUQ71F23 418 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 TRABD2AQ86V40 505 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 RFX6Q8HWS3 928 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 HACE1Q8IYU2 909 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 SMG8Q8ND04 991 aaKnown RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 CMASQ8NFW8 434 aaPredicted RBP15.69■□□□□ 0.1
TPM3-208ENST00000341485 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 VPS37BQ9H9H4 285 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 TUBGCP4Q9UGJ1 667 aa15.69■□□□□ 0.1
TPM3-208ENST00000341485 POC1B-GALNT4F8VUJ3 575 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 GOLGA8MH3BSY2 632 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms