RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MMADHCQ9H3L0 296 aaPredicted RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 A0A0B4J269 797 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CD3EAPO15446 510 aaKnown RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 NOS3P29474 1203 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 GPC1P35052 558 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 TUBB3Q13509 450 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 KDM7AQ6ZMT4 941 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 C2orf69Q8N8R5 385 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 KCTD14Q9BQ13 255 aaPredicted RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CCDC162PA2VCL2 907 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CYP26A1O43174 497 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 TPST1O60507 370 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 MSH3P20585 1137 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CRKP46108 304 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 MAD2L1Q13257 205 aaPredicted RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CASP12Q6UXS9 341 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 C11orf96Q7Z7L8 435 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 DDX18Q9NVP1 670 aaKnown RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 GH2P01242 217 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CDC16Q13042 620 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 DALRD3Q5D0E6 543 aaKnown RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 TFDP3Q5H9I0 405 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CINPQ9BW66 212 aaPredicted RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 SLC39A10Q9ULF5 831 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ZNF185O15231 689 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 SEMA3DO95025 777 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CHRM3P20309 590 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 PTGER2P43116 358 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CPA2P48052 419 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 BTN3A2P78410 334 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 GALNTL6Q49A17 601 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 OSBP2Q969R2 916 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 MYL12BO14950 172 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 DYNC1LI2O43237 492 aaPredicted RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PDGFRAP16234 1089 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PAICSP22234 425 aaKnown RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 FASP25445 335 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 MZF1P28698 734 aaPredicted RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 GPR1P46091 355 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 MFSD4BQ5TF39 518 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PRRG1O14668 218 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 KATNA1O75449 491 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CCNA2P20248 432 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ALDH1A3P47895 512 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PRKAA2P54646 552 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 GMFBP60983 142 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ADGRF4Q8IZF3 695 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 KLHL28Q9NXS3 571 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 HAO1Q9UJM8 370 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CHP2O43745 196 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 RPN2P04844 631 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CYP2E1P05181 493 aaPredicted RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 TRAP1Q12931 704 aaKnown RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ATP6AP1LQ52LC2 224 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 TMEM26Q6ZUK4 368 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 TAGLN3Q9UI15 199 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 R3HDM2Q9Y2K5 976 aaKnown RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 LOC100653049A0A140TA62 436 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ACLYP53396 1101 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 DENND1BQ6P3S1 775 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PADI4Q9UM07 663 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 AP3M1Q9Y2T2 418 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 POU1F1P28069 291 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 Q4G0T1 1027 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 EMILIN2Q9BXX0 1053 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 VPS26AO75436 327 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CCDC166P0CW27 439 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 TFE3P19532 575 aaPredicted RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ACADLP28330 430 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CRLS1Q9UJA2 301 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
SRRM4-201ENST00000267260 CCDC189A1A4V9 331 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 ZNF682O95780 498 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 S100A13Q99584 98 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 LNPEPQ9UIQ6 1025 aa12.47□□□□□ -0.41
SRRM4-201ENST00000267260 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms