RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SPC1P46965 94 aa0.86□□□□□ -2.27
SRL1YOR247W ATG2P53855 1592 aa0.86□□□□□ -2.27
SRL1YOR247W RPA190P10964 1664 aaKnown RBP0.85□□□□□ -2.27
SRL1YOR247W YDR029WQ12111 104 aa0.85□□□□□ -2.27
SRL1YOR247W YOR093CQ12275 1648 aa0.85□□□□□ -2.27
SRL1YOR247W RKR1Q04781 1562 aa0.84□□□□□ -2.27
SRL1YOR247W SIN3P22579 1536 aa0.84□□□□□ -2.28
SRL1YOR247W MYO1P08964 1928 aa0.83□□□□□ -2.28
SRL1YOR247W MMS1Q06211 1407 aa0.83□□□□□ -2.28
SRL1YOR247W YDR042CQ03205 200 aa0.83□□□□□ -2.28
SRL1YOR247W DNF2Q12675 1612 aa0.82□□□□□ -2.28
SRL1YOR247W PDX3P38075 228 aaKnown RBP0.82□□□□□ -2.28
SRL1YOR247W YCR075W-AQ3E830 75 aa0.82□□□□□ -2.28
SRL1YOR247W PDR15Q04182 1529 aaKnown RBP0.82□□□□□ -2.28
SRL1YOR247W SNF2P22082 1703 aa0.81□□□□□ -2.28
SRL1YOR247W RPA12P32529 125 aaKnown RBP0.81□□□□□ -2.28
SRL1YOR247W MHF2Q3E829 80 aa0.81□□□□□ -2.28
SRL1YOR247W YCL001W-BQ96VH2 84 aa0.81□□□□□ -2.28
SRL1YOR247W VPS15P22219 1454 aa0.8□□□□□ -2.28
SRL1YOR247W UFD4P33202 1483 aa0.8□□□□□ -2.28
SRL1YOR247W SCC2Q04002 1493 aa0.8□□□□□ -2.28
SRL1YOR247W HAP1P0CE41 1502 aa0.79□□□□□ -2.28
SRL1YOR247W XRN1P22147 1528 aaKnown RBP0.79□□□□□ -2.28
SRL1YOR247W ESP1Q03018 1630 aa0.79□□□□□ -2.28
SRL1YOR247W BSC4P53841 131 aa0.79□□□□□ -2.28
SRL1YOR247W YNL190WP53872 204 aa0.79□□□□□ -2.28
SRL1YOR247W YRF1-1P0CX20 1796 aa0.78□□□□□ -2.28
SRL1YOR247W YRF1-5P0CX21 1796 aa0.78□□□□□ -2.28
SRL1YOR247W YRF1-8P0CX22 1796 aa0.78□□□□□ -2.28
SRL1YOR247W FAS2P19097 1887 aaKnown RBP0.78□□□□□ -2.28
SRL1YOR247W ECM12O13529 151 aa0.78□□□□□ -2.28
SRL1YOR247W YNL198CP40166 100 aa0.78□□□□□ -2.28
SRL1YOR247W YNL042W-BQ3E7Z2 85 aa0.78□□□□□ -2.28
SRL1YOR247W NUP159P40477 1460 aa0.78□□□□□ -2.28
SRL1YOR247W NUP170P38181 1502 aa0.78□□□□□ -2.28
SRL1YOR247W RPC10P40422 70 aa0.77□□□□□ -2.29
SRL1YOR247W RPL38P49167 78 aaKnown RBP0.77□□□□□ -2.29
SRL1YOR247W SPO14P36126 1683 aa0.77□□□□□ -2.29
SRL1YOR247W RIM15P43565 1770 aa0.76□□□□□ -2.29
SRL1YOR247W DOP1Q03921 1698 aa0.76□□□□□ -2.29
SRL1YOR247W DNF3Q12674 1656 aa0.76□□□□□ -2.29
SRL1YOR247W BUD3P25558 1636 aa0.76□□□□□ -2.29
SRL1YOR247W PDR12Q02785 1511 aa0.76□□□□□ -2.29
SRL1YOR247W GDB1Q06625 1536 aa0.76□□□□□ -2.29
SRL1YOR247W MMS22Q06164 1454 aa0.76□□□□□ -2.29
SRL1YOR247W SKI3P17883 1432 aaKnown RBP0.76□□□□□ -2.29
SRL1YOR247W COX7P10174 60 aa0.76□□□□□ -2.29
SRL1YOR247W YMR082CQ04276 118 aa0.76□□□□□ -2.29
SRL1YOR247W SCP1Q08873 200 aa0.76□□□□□ -2.29
SRL1YOR247W ARO1P08566 1588 aaKnown RBP0.75□□□□□ -2.29
SRL1YOR247W TY3B-GQ99315 1547 aa0.75□□□□□ -2.29
SRL1YOR247W MYO4P32492 1471 aa0.75□□□□□ -2.29
SRL1YOR247W NHP2P32495 156 aaPredicted RBP0.75□□□□□ -2.29
SRL1YOR247W IQG1Q12280 1495 aa0.74□□□□□ -2.29
SRL1YOR247W SMC4Q12267 1418 aa0.74□□□□□ -2.29
SRL1YOR247W Q0032Q9ZZX7 96 aa0.74□□□□□ -2.29
SRL1YOR247W TY1B-BRQ12193 1756 aa0.74□□□□□ -2.29
SRL1YOR247W TY1B-GR3Q12316 1755 aa0.74□□□□□ -2.29
SRL1YOR247W TY1B-ORQ92393 1755 aa0.74□□□□□ -2.29
SRL1YOR247W PDR10P51533 1564 aa0.74□□□□□ -2.29
SRL1YOR247W STU1P38198 1513 aa0.74□□□□□ -2.29
SRL1YOR247W VTH1P40438 1549 aa0.74□□□□□ -2.29
SRL1YOR247W VTH2P40890 1549 aa0.74□□□□□ -2.29
SRL1YOR247W BCK1Q01389 1478 aa0.73□□□□□ -2.29
SRL1YOR247W RPO21P04050 1733 aaKnown RBP0.73□□□□□ -2.29
SRL1YOR247W TY1B-NL2Q99337 1749 aaKnown RBP0.73□□□□□ -2.29
SRL1YOR247W CHC1P22137 1653 aaKnown RBP0.73□□□□□ -2.29
SRL1YOR247W YRF1-2P40105 1681 aa0.73□□□□□ -2.29
SRL1YOR247W ATX1P38636 73 aa0.73□□□□□ -2.29
SRL1YOR247W YGL194C-AQ2V2P6 80 aa0.73□□□□□ -2.29
SRL1YOR247W ULS1Q08562 1619 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-LR1P0C2J3 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-FP0CX63 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-GR2P0CX64 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-CP25384 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-DR2Q03494 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY1B-DR1Q03855 1755 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-DR3Q07791 1770 aaKnown RBP0.73□□□□□ -2.29
SRL1YOR247W TY2B-OR1Q12113 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-DR1Q12472 1770 aa0.73□□□□□ -2.29
SRL1YOR247W TY2B-OR2Q12501 1770 aa0.73□□□□□ -2.29
SRL1YOR247W IML1P47170 1584 aa0.72□□□□□ -2.29
SRL1YOR247W YJR107C-AP0CT86 78 aa0.72□□□□□ -2.29
SRL1YOR247W YBR201C-AQ2V2Q3 67 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-DR5P0C2I2 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-DR6P0C2I3 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-LR2P0C2I5 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-LR3P0C2I6 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-PR1P0C2I9 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-PR2P0C2J0 1756 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-PR3P0C2J1 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-JR1P47098 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-ML2Q03434 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-ER1Q03612 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-ML1Q04711 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-GR2Q12269 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-OLQ12273 1755 aa0.72□□□□□ -2.29
SRL1YOR247W TY1B-PLQ12414 1755 aaKnown RBP0.72□□□□□ -2.29
SRL1YOR247W TY1B-BLQ12490 1755 aa0.72□□□□□ -2.29
SRL1YOR247W POL1P13382 1468 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms