RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YNL190W	P53872	204 aa		1.03	□□□□□ -2.24
RSA3	YLR221C	YKL068W-A	Q3E826	78 aa		1.03	□□□□□ -2.24
RSA3	YLR221C	PDR15	Q04182	1529 aa	Known RBP	1.03	□□□□□ -2.24
RSA3	YLR221C	RKR1	Q04781	1562 aa		1.03	□□□□□ -2.24
RSA3	YLR221C	NTE1	Q04958	1679 aa		1.03	□□□□□ -2.24
RSA3	YLR221C	YCR075W-A	Q3E830	75 aa		1.02	□□□□□ -2.25
RSA3	YLR221C	ATG2	P53855	1592 aa		1	□□□□□ -2.25
RSA3	YLR221C	VPS15	P22219	1454 aa		1	□□□□□ -2.25
RSA3	YLR221C	NHP10	Q03435	203 aa		1	□□□□□ -2.25
RSA3	YLR221C	UFD4	P33202	1483 aa		0.99	□□□□□ -2.25
RSA3	YLR221C	RSF2	P46974	1380 aa		0.99	□□□□□ -2.25
RSA3	YLR221C	SCP1	Q08873	200 aa		0.99	□□□□□ -2.25
RSA3	YLR221C	PDR10	P51533	1564 aa		0.99	□□□□□ -2.25
RSA3	YLR221C	SPC1	P46965	94 aa		0.98	□□□□□ -2.25
RSA3	YLR221C	PAU4	P53427	120 aa		0.98	□□□□□ -2.25
RSA3	YLR221C	YGL194C-A	Q2V2P6	80 aa		0.98	□□□□□ -2.25
RSA3	YLR221C	XRN1	P22147	1528 aa	Known RBP	0.98	□□□□□ -2.25
RSA3	YLR221C	SNU13	P39990	126 aa	Known RBP	0.97	□□□□□ -2.25
RSA3	YLR221C	NUP170	P38181	1502 aa		0.97	□□□□□ -2.25
RSA3	YLR221C	DOP1	Q03921	1698 aa		0.97	□□□□□ -2.25
RSA3	YLR221C	YSP2	Q06681	1438 aa		0.97	□□□□□ -2.25
RSA3	YLR221C	YNL198C	P40166	100 aa		0.96	□□□□□ -2.26
RSA3	YLR221C	YMR082C	Q04276	118 aa		0.96	□□□□□ -2.26
RSA3	YLR221C	RRT15	Q3E811	62 aa		0.96	□□□□□ -2.26
RSA3	YLR221C	SCC2	Q04002	1493 aa		0.96	□□□□□ -2.26
RSA3	YLR221C	POL2	P21951	2222 aa	Known RBP	0.96	□□□□□ -2.26
RSA3	YLR221C	NUP159	P40477	1460 aa		0.95	□□□□□ -2.26
RSA3	YLR221C	DNF3	Q12674	1656 aa		0.94	□□□□□ -2.26
RSA3	YLR221C	RPC10	P40422	70 aa		0.94	□□□□□ -2.26
RSA3	YLR221C	MSL1	P40567	111 aa	Predicted RBP	0.94	□□□□□ -2.26
RSA3	YLR221C	YDR029W	Q12111	104 aa		0.94	□□□□□ -2.26
RSA3	YLR221C	YRF1-1	P0CX20	1796 aa		0.93	□□□□□ -2.26
RSA3	YLR221C	YRF1-5	P0CX21	1796 aa		0.93	□□□□□ -2.26
RSA3	YLR221C	YRF1-8	P0CX22	1796 aa		0.93	□□□□□ -2.26
RSA3	YLR221C	CUP1-1	P0CX80	61 aa		0.93	□□□□□ -2.26
RSA3	YLR221C	CUP1-2	P0CX81	61 aa		0.93	□□□□□ -2.26
RSA3	YLR221C	FAS2	P19097	1887 aa	Known RBP	0.92	□□□□□ -2.26
RSA3	YLR221C	ARO1	P08566	1588 aa	Known RBP	0.92	□□□□□ -2.26
RSA3	YLR221C	ECM12	O13529	151 aa		0.92	□□□□□ -2.26
RSA3	YLR221C	YDR042C	Q03205	200 aa		0.92	□□□□□ -2.26
RSA3	YLR221C	YMR175W-A	Q3E766	64 aa		0.92	□□□□□ -2.26
RSA3	YLR221C	ESP1	Q03018	1630 aa		0.92	□□□□□ -2.26
RSA3	YLR221C	SPO14	P36126	1683 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	USO1	P25386	1790 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	YPR117W	Q06116	2489 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	BUD3	P25558	1636 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	ULS1	Q08562	1619 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	MMS22	Q06164	1454 aa		0.91	□□□□□ -2.26
RSA3	YLR221C	GDB1	Q06625	1536 aa		0.9	□□□□□ -2.26
RSA3	YLR221C	TY1B-BR	Q12193	1756 aa		0.9	□□□□□ -2.27
RSA3	YLR221C	TY1B-GR3	Q12316	1755 aa		0.9	□□□□□ -2.27
RSA3	YLR221C	TY1B-OR	Q92393	1755 aa		0.9	□□□□□ -2.27
RSA3	YLR221C	TY1B-PR2	P0C2J0	1756 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	RIM15	P43565	1770 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	MYO4	P32492	1471 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	YCR085W	P25650	117 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	ATX1	P38636	73 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	CWP2	P43497	92 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	SUS1	Q6WNK7	96 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	MYO1	P08964	1928 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	HAP1	P0CE41	1502 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	TY3B-G	Q99315	1547 aa		0.89	□□□□□ -2.27
RSA3	YLR221C	TOM1	Q03280	3268 aa		0.88	□□□□□ -2.27
RSA3	YLR221C	CHC1	P22137	1653 aa	Known RBP	0.88	□□□□□ -2.27
RSA3	YLR221C	POC4	Q12245	148 aa	Predicted RBP	0.88	□□□□□ -2.27
RSA3	YLR221C	TOR1	P35169	2470 aa		0.88	□□□□□ -2.27
RSA3	YLR221C	GCN2	P15442	1659 aa		0.88	□□□□□ -2.27
RSA3	YLR221C	BCK1	Q01389	1478 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	IQG1	Q12280	1495 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	RPL38	P49167	78 aa	Known RBP	0.87	□□□□□ -2.27
RSA3	YLR221C	YHR213W-A	Q8TGT4	77 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-LR1	P0C2J3	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-F	P0CX63	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-GR2	P0CX64	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-C	P25384	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-DR2	Q03494	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY1B-DR1	Q03855	1755 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-DR3	Q07791	1770 aa	Known RBP	0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-OR1	Q12113	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-DR1	Q12472	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY2B-OR2	Q12501	1770 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	SMC4	Q12267	1418 aa		0.87	□□□□□ -2.27
RSA3	YLR221C	TY1B-DR5	P0C2I2	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-DR6	P0C2I3	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-LR2	P0C2I5	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-JR1	P47098	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-ML2	Q03434	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-ER1	Q03612	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-ML1	Q04711	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-GR2	Q12269	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-OL	Q12273	1755 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	TY1B-PL	Q12414	1755 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	PDR5	P33302	1511 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	STU1	P38198	1513 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	YBT1	P32386	1661 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	MLP2	P40457	1679 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	IML1	P47170	1584 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms