RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C POL1P13382 1468 aa0.71□□□□□ -2.3
HIR3YJR140C TY1B-HO13535 1793 aa0.71□□□□□ -2.3
HIR3YJR140C SCC2Q04002 1493 aa0.71□□□□□ -2.3
HIR3YJR140C YLR255CO13574 117 aa0.71□□□□□ -2.3
HIR3YJR140C BPT1P14772 1559 aa0.71□□□□□ -2.3
HIR3YJR140C DYN1P36022 4092 aa0.71□□□□□ -2.3
HIR3YJR140C GSC2P40989 1895 aa0.71□□□□□ -2.3
HIR3YJR140C YBL071CP38185 102 aa0.71□□□□□ -2.3
HIR3YJR140C MRPS12P53732 153 aa0.71□□□□□ -2.3
HIR3YJR140C ECM12O13529 151 aa0.7□□□□□ -2.3
HIR3YJR140C VPS15P22219 1454 aa0.7□□□□□ -2.3
HIR3YJR140C SLH1P53327 1967 aaKnown RBP0.7□□□□□ -2.3
HIR3YJR140C PAU5P43575 122 aa0.7□□□□□ -2.3
HIR3YJR140C RPL38P49167 78 aaKnown RBP0.69□□□□□ -2.3
HIR3YJR140C UFD4P33202 1483 aa0.69□□□□□ -2.3
HIR3YJR140C RPO31P04051 1460 aa0.69□□□□□ -2.3
HIR3YJR140C GDB1Q06625 1536 aa0.69□□□□□ -2.3
HIR3YJR140C MYO4P32492 1471 aa0.69□□□□□ -2.3
HIR3YJR140C CDC39P25655 2108 aaKnown RBP0.69□□□□□ -2.3
HIR3YJR140C SPT6P23615 1451 aaKnown RBP0.68□□□□□ -2.3
HIR3YJR140C RPS11AP0CX47 156 aaKnown RBP0.68□□□□□ -2.3
HIR3YJR140C RPS11BP0CX48 156 aaKnown RBP0.68□□□□□ -2.3
HIR3YJR140C YHR214C-DP0CX93 97 aa0.68□□□□□ -2.3
HIR3YJR140C MRPL38P35996 138 aaPredicted RBP0.68□□□□□ -2.3
HIR3YJR140C BSC4P53841 131 aa0.68□□□□□ -2.3
HIR3YJR140C RPA190P10964 1664 aaKnown RBP0.68□□□□□ -2.3
HIR3YJR140C RPS29BP41058 56 aaKnown RBP0.68□□□□□ -2.3
HIR3YJR140C PDR12Q02785 1511 aa0.68□□□□□ -2.3
HIR3YJR140C COX7P10174 60 aa0.67□□□□□ -2.3
HIR3YJR140C YDR210WQ03482 75 aa0.67□□□□□ -2.3
HIR3YJR140C YNR034W-AQ3E841 98 aa0.67□□□□□ -2.3
HIR3YJR140C TY4B-HP0C2J7 1802 aa0.67□□□□□ -2.3
HIR3YJR140C TOM6P33448 61 aa0.67□□□□□ -2.3
HIR3YJR140C DNF3Q12674 1656 aa0.66□□□□□ -2.3
HIR3YJR140C URB1P34241 1764 aaKnown RBP0.66□□□□□ -2.3
HIR3YJR140C CDC25P04821 1589 aa0.66□□□□□ -2.3
HIR3YJR140C YDR042CQ03205 200 aa0.66□□□□□ -2.3
HIR3YJR140C YCR075W-AQ3E830 75 aa0.66□□□□□ -2.3
HIR3YJR140C IQG1Q12280 1495 aa0.66□□□□□ -2.3
HIR3YJR140C YNL198CP40166 100 aa0.65□□□□□ -2.3
HIR3YJR140C SPC1P46965 94 aa0.65□□□□□ -2.3
HIR3YJR140C YNL042W-BQ3E7Z2 85 aa0.65□□□□□ -2.3
HIR3YJR140C SCP1Q08873 200 aa0.65□□□□□ -2.31
HIR3YJR140C VTH1P40438 1549 aa0.65□□□□□ -2.31
HIR3YJR140C VTH2P40890 1549 aa0.65□□□□□ -2.31
HIR3YJR140C YOR343CQ12484 108 aa0.65□□□□□ -2.31
HIR3YJR140C SPO14P36126 1683 aa0.65□□□□□ -2.31
HIR3YJR140C PDR5P33302 1511 aaKnown RBP0.65□□□□□ -2.31
HIR3YJR140C YOL164W-AQ3E7A5 60 aa0.64□□□□□ -2.31
HIR3YJR140C BCK1Q01389 1478 aa0.64□□□□□ -2.31
HIR3YJR140C NUP170P38181 1502 aa0.64□□□□□ -2.31
HIR3YJR140C FPR2P32472 135 aa0.64□□□□□ -2.31
HIR3YJR140C ESP1Q03018 1630 aa0.64□□□□□ -2.31
HIR3YJR140C PEP1P32319 1579 aa0.64□□□□□ -2.31
HIR3YJR140C YOL097W-AQ3E7Y9 61 aa0.64□□□□□ -2.31
HIR3YJR140C YMR105W-AQ8TGS8 64 aa0.64□□□□□ -2.31
HIR3YJR140C YKL065W-AQ2V2P2 73 aa0.63□□□□□ -2.31
HIR3YJR140C VMR1P38735 1592 aa0.63□□□□□ -2.31
HIR3YJR140C PDR10P51533 1564 aa0.63□□□□□ -2.31
HIR3YJR140C HIR3P47171 1648 aa0.63□□□□□ -2.31
HIR3YJR140C RPS29AP41057 56 aaKnown RBP0.63□□□□□ -2.31
HIR3YJR140C YMR082CQ04276 118 aa0.62□□□□□ -2.31
HIR3YJR140C Q0032Q9ZZX7 96 aa0.62□□□□□ -2.31
HIR3YJR140C SDH6Q3E785 79 aa0.62□□□□□ -2.31
HIR3YJR140C DOP1Q03921 1698 aa0.61□□□□□ -2.31
HIR3YJR140C RRP5Q05022 1729 aaKnown RBP0.61□□□□□ -2.31
HIR3YJR140C YOR105WQ08504 108 aa0.61□□□□□ -2.31
HIR3YJR140C YJR107C-AP0CT86 78 aa0.61□□□□□ -2.31
HIR3YJR140C CUP1-1P0CX80 61 aa0.61□□□□□ -2.31
HIR3YJR140C CUP1-2P0CX81 61 aa0.61□□□□□ -2.31
HIR3YJR140C ATP18P81450 59 aa0.61□□□□□ -2.31
HIR3YJR140C RRT15Q3E811 62 aa0.61□□□□□ -2.31
HIR3YJR140C AUA1P32450 94 aa0.61□□□□□ -2.31
HIR3YJR140C YNL190WP53872 204 aa0.6□□□□□ -2.31
HIR3YJR140C YBR201C-AQ2V2Q3 67 aa0.6□□□□□ -2.31
HIR3YJR140C HFA1P32874 2273 aa0.6□□□□□ -2.31
HIR3YJR140C RPA12P32529 125 aaKnown RBP0.6□□□□□ -2.31
HIR3YJR140C RIM15P43565 1770 aa0.6□□□□□ -2.31
HIR3YJR140C RPC10P40422 70 aa0.6□□□□□ -2.31
HIR3YJR140C YAL065CO13511 128 aa0.59□□□□□ -2.31
HIR3YJR140C YBR032WP38223 100 aa0.59□□□□□ -2.31
HIR3YJR140C YCR085WP25650 117 aa0.59□□□□□ -2.32
HIR3YJR140C YGL194C-AQ2V2P6 80 aa0.59□□□□□ -2.32
HIR3YJR140C TY1B-DR4Q07793 1604 aa0.58□□□□□ -2.32
HIR3YJR140C PAU23Q07987 124 aa0.58□□□□□ -2.32
HIR3YJR140C PAU17Q12370 124 aa0.58□□□□□ -2.32
HIR3YJR140C YIL134C-AQ45U18 67 aa0.58□□□□□ -2.32
HIR3YJR140C SEC7P11075 2009 aaKnown RBP0.58□□□□□ -2.32
HIR3YJR140C CWP2P43497 92 aa0.58□□□□□ -2.32
HIR3YJR140C EDC1P53080 175 aaPredicted RBP0.57□□□□□ -2.32
HIR3YJR140C TY1B-BLQ12490 1755 aa0.57□□□□□ -2.32
HIR3YJR140C SGF11Q03067 99 aa0.57□□□□□ -2.32
HIR3YJR140C YOR314WQ12506 109 aa0.57□□□□□ -2.32
HIR3YJR140C MLP2P40457 1679 aa0.57□□□□□ -2.32
HIR3YJR140C LAA1P39526 2014 aa0.57□□□□□ -2.32
HIR3YJR140C YMR122W-AQ3E842 84 aa0.56□□□□□ -2.32
HIR3YJR140C MYO1P08964 1928 aa0.56□□□□□ -2.32
HIR3YJR140C YPR108W-AQ3E7B3 70 aa0.56□□□□□ -2.32
HIR3YJR140C RPO21P04050 1733 aaKnown RBP0.56□□□□□ -2.32
HIR3YJR140C GCN2P15442 1659 aa0.56□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms