RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 AVPR1AP37288 418 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 PPP3CCP48454 512 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 PGFP49763 221 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 WDR44Q5JSH3 913 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 PPP1R26Q5T8A7 1209 aaPredicted RBP18.54■□□□□ 0.56
IRF3-230ENST00000601809 RBM43Q6ZSC3 357 aaKnown RBP18.54■□□□□ 0.56
IRF3-230ENST00000601809 GPRIN1Q7Z2K8 1008 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 TTC39CQ8N584 583 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 ARL14EPQ8N8R7 260 aaPredicted RBP18.54■□□□□ 0.56
IRF3-230ENST00000601809 DTWD2Q8NBA8 298 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 OVCA2Q8WZ82 227 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 CLDN23Q96B33 292 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 CYFIP2Q96F07 1278 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 MED10Q9BTT4 135 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 RNF38Q9H0F5 515 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 NUP62CLQ9H1M0 184 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 HPS4Q9NQG7 708 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 COMMD8Q9NX08 183 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 EHD2Q9NZN4 543 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 TRPM5Q9NZQ8 1165 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 SIT1Q9Y3P8 196 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 MYO16Q9Y6X6 1858 aa18.54■□□□□ 0.56
IRF3-230ENST00000601809 VPS13AQ96RL7 3174 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 DPYSL4O14531 572 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 RTN3O95197 1032 aaPredicted RBP18.53■□□□□ 0.56
IRF3-230ENST00000601809 USP17L7P0C7H9 530 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 ACO1P21399 889 aaKnown RBP18.53■□□□□ 0.56
IRF3-230ENST00000601809 ADORA2BP29275 332 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 PTPN5P54829 565 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 TNK2Q07912 1038 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 KCNH2Q12809 1159 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 DPCR1Q3MIW9 517 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 ARHGAP17Q68EM7 881 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 TMEM176AQ96HP8 235 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 PNPLA8Q9NP80 782 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 ARHGAP26Q9UNA1 814 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 PIAS3Q9Y6X2 628 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
IRF3-230ENST00000601809 TRAV19A0A0A6YYK7 116 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 OTOL1A6NHN0 477 aaPredicted RBP18.52■□□□□ 0.56
IRF3-230ENST00000601809 FAM200BP0CF97 657 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 YWHAQP27348 245 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 MAP3K7CLP57077 242 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 SLC7A9P82251 487 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 PLCB2Q00722 1185 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 ZNF394Q53GI3 561 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 TXNDC11Q6PKC3 985 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 YAF2Q8IY57 180 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 KAT5Q92993 513 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 ZFRQ96KR1 1074 aaKnown RBP18.52■□□□□ 0.56
IRF3-230ENST00000601809 TRPC7Q9HCX4 862 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 GTSE1Q9NYZ3 720 aa18.52■□□□□ 0.56
IRF3-230ENST00000601809 FAM170BA6NMN3 283 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 HDCP19113 662 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 SOX9P48436 509 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 ZNF852Q6ZMS4 543 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 ARHGEF19Q8IW93 802 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 MAML2Q8IZL2 1156 aaPredicted RBP18.51■□□□□ 0.55
IRF3-230ENST00000601809 EHBP1Q8NDI1 1231 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 PDZD8Q8NEN9 1154 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 FBXO32Q969P5 355 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 MSANTD3Q96H12 275 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
IRF3-230ENST00000601809 GBP4Q96PP9 640 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 SLITRK1Q96PX8 696 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 DUSP16Q9BY84 665 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 GKN1Q9NS71 199 aa18.51■□□□□ 0.55
IRF3-230ENST00000601809 CACNA1IQ9P0X4 2223 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 STK25O00506 426 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 MAN2B1O00754 1011 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 AFPP02771 609 aaKnown RBP18.5■□□□□ 0.55
IRF3-230ENST00000601809 CKMP06732 381 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 TBXAS1P24557 533 aaPredicted RBP18.5■□□□□ 0.55
IRF3-230ENST00000601809 CTHP32929 405 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 RPS9P46781 194 aaKnown RBP18.5■□□□□ 0.55
IRF3-230ENST00000601809 LRMPQ12912 555 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 MTF1Q14872 753 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 UBXN2BQ14CS0 331 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 TTC30AQ86WT1 665 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 SH3RF2Q8TEC5 729 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 NELL2Q99435 816 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 C8orf33Q9H7E9 229 aaPredicted RBP18.5■□□□□ 0.55
IRF3-230ENST00000601809 GMIPQ9P107 970 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
IRF3-230ENST00000601809 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.5■□□□□ 0.557e-6■■■■■ 33.3
IRF3-230ENST00000601809 USP3Q9Y6I4 520 aa18.5■□□□□ 0.55
IRF3-230ENST00000601809 FANCMQ8IYD8 2048 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 SPECC1L-ADORA2AF8WAN1 911 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 RNF225M0QZC1 329 aaPredicted RBP18.49■□□□□ 0.55
IRF3-230ENST00000601809 COCHO43405 550 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 FGFR1OPO95684 399 aaKnown RBP18.49■□□□□ 0.55
IRF3-230ENST00000601809 CCDC192P0DO97 292 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 ERCC5P28715 1186 aaPredicted RBP18.49■□□□□ 0.55
IRF3-230ENST00000601809 TUBP50607 506 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 KIF11P52732 1056 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 ZNF132P52740 706 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 IFRD2Q12894 506 aaPredicted RBP18.49■□□□□ 0.55
IRF3-230ENST00000601809 PKDCCQ504Y2 493 aa18.49■□□□□ 0.55
IRF3-230ENST00000601809 RAB41Q5JT25 222 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms