RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CLDN10P78369 228 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 GRSF1Q12849 480 aaKnown RBP eCLIP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 MTF1Q14872 753 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 STX1AQ16623 288 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 CT47A1Q5JQC4 288 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 SCARA5Q6ZMJ2 495 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 RBM43Q6ZSC3 357 aaKnown RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 ZC3H3Q8IXZ2 948 aaKnown RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 SYNPOQ8N3V7 929 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 SPEM1Q8N4L4 309 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 CPA6Q8N4T0 437 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 ARL14EPQ8N8R7 260 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 B3GALNT2Q8NCR0 500 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 RUBCNQ92622 972 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 DUSP9Q99956 384 aaKnown RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 PRMT8Q9NR22 394 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 DUS2Q9NX74 493 aaKnown RBP19.88■□□□□ 0.77
ATG4D-203ENST00000585752 TMEM63CQ9P1W3 806 aa19.88■□□□□ 0.77
ATG4D-203ENST00000585752 F5P12259 2224 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 SHISA7A6NL88 538 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 C4BPAP04003 597 aaKnown RBP19.87■□□□□ 0.77
ATG4D-203ENST00000585752 PFKLP17858 780 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 ERCC5P28715 1186 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-203ENST00000585752 GTF2H1P32780 548 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 GCLMP48507 274 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 TRIM68Q6AZZ1 485 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 TAF4BQ92750 862 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 C8orf48Q96LL4 319 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 CYP2S1Q96SQ9 504 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 FAM83CQ9BQN1 747 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 DPEP3Q9H4B8 488 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 VRTNQ9H8Y1 702 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 TMEM8AQ9HCN3 771 aa19.87■□□□□ 0.77
ATG4D-203ENST00000585752 USP34Q70CQ2 3546 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 RTN3O95197 1032 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-203ENST00000585752 MXI1P50539 228 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 CDH8P55286 799 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 NOP14P78316 857 aaKnown RBP19.86■□□□□ 0.77
ATG4D-203ENST00000585752 KRT39Q6A163 491 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 TXNDC11Q6PKC3 985 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 MAMSTRQ6ZN01 415 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 SV2AQ7L0J3 742 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 FAM114A1Q8IWE2 563 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 NUP93Q8N1F7 819 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 ATP2A3Q93084 1043 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 GZF1Q9H116 711 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-203ENST00000585752 XYLT2Q9H1B5 865 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 SMYD3Q9H7B4 428 aa19.86■□□□□ 0.77
ATG4D-203ENST00000585752 RBM12Q9NTZ6 932 aaKnown RBP19.86■□□□□ 0.77
ATG4D-203ENST00000585752 ATG2BQ96BY7 2078 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 C2orf78A6NCI8 922 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 ATG13O75143 517 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 TADA3O75528 432 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 RAP1GAPP47736 663 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 CETN1Q12798 172 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 ZACNQ401N2 412 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 ZNF687Q8N1G0 1237 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 ZBTB44Q8NCP5 570 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 SH3RF2Q8TEC5 729 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 OSCP1Q8WVF1 389 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 ZNF518BQ9C0D4 1074 aa19.85■□□□□ 0.77
ATG4D-203ENST00000585752 CLDN5O00501 218 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 HLA-DRAP01903 254 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 YWHAQP27348 245 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 KIAA2013Q8IYS2 634 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 PDZD8Q8NEN9 1154 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 SMARCD1Q96GM5 515 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 B3GNT5Q9BYG0 378 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 NAT10Q9H0A0 1025 aaKnown RBP19.84■□□□□ 0.77
ATG4D-203ENST00000585752 ECT2Q9H8V3 914 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 HPS4Q9NQG7 708 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 GMEB2Q9UKD1 530 aa19.84■□□□□ 0.77
ATG4D-203ENST00000585752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.84■□□□□ 0.77
ATG4D-203ENST00000585752 NFATC1O95644 943 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 MBL2P11226 248 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-203ENST00000585752 ARSAP15289 507 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 MTIF2P46199 727 aaKnown RBP19.83■□□□□ 0.77
ATG4D-203ENST00000585752 USP46P62068 366 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 SATB1Q01826 763 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 PPP3CAQ08209 521 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 TAF10Q12962 218 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 ZNF77Q15935 545 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 WDR44Q5JSH3 913 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 PRR23BQ6ZRT6 265 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 ACOT1Q86TX2 421 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 FBXL13Q8NEE6 735 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 CCDC26Q8TAB7 109 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 FBXO32Q969P5 355 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 CNOT6LQ96LI5 555 aaKnown RBP19.83■□□□□ 0.77
ATG4D-203ENST00000585752 SLC22A12Q96S37 553 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 P2RY13Q9BPV8 354 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 NACA2Q9H009 215 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 THAP9Q9H5L6 903 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 ARHGAP26Q9UNA1 814 aa19.83■□□□□ 0.77
ATG4D-203ENST00000585752 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
ATG4D-203ENST00000585752 AP1G2O75843 785 aa19.82■□□□□ 0.76
ATG4D-203ENST00000585752 VNN1O95497 513 aa19.82■□□□□ 0.76
ATG4D-203ENST00000585752 DRD1P21728 446 aa19.82■□□□□ 0.76
ATG4D-203ENST00000585752 TYRO3Q06418 890 aa19.82■□□□□ 0.76
ATG4D-203ENST00000585752 C1orf220Q5T0J3 134 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms