RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 RNF38Q9H0F5 515 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 MIR1-1HGQ9H1L0 117 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 CLMPQ9H6B4 373 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 CD248Q9HCU0 757 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 SUSD2Q9UGT4 822 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 DNMT3LQ9UJW3 386 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 CPQQ9Y646 472 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 UNC79Q9P2D8 2635 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 COL12A1Q99715 3063 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 PIEZO2Q9H5I5 2752 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 TBC1D3BA6NDS4 549 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 USP46P62068 366 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 TSPY1Q01534 308 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 SEMG2Q02383 582 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 PDIA5Q14554 519 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 SMAD1Q15797 465 aaKnown RBP15.49■□□□□ 0.07
VPS29-209ENST00000551655 HLA-BQ31612 363 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 LY6G5CQ5SRR4 150 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 C10orf76Q5T2E6 689 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 SYCP2LQ5T4T6 812 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 EGFLAMQ63HQ2 1017 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 SCARA3Q6AZY7 606 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 LSM14AQ8ND56 463 aaKnown RBP15.49■□□□□ 0.07
VPS29-209ENST00000551655 PKMYT1Q99640 499 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 NTPCRQ9BSD7 190 aaKnown RBP15.49■□□□□ 0.07
VPS29-209ENST00000551655 ZDHHC5Q9C0B5 715 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 CFAP97Q9P2B7 532 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 LRWD1Q9UFC0 647 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 GTF3C4Q9UKN8 822 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.49■□□□□ 0.07
VPS29-209ENST00000551655 SPTA1P02549 2419 aa15.49■□□□□ 0.07
VPS29-209ENST00000551655 A0A1B0GTW7 788 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 MEI4A8MW99 385 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 CAPN9O14815 690 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 OGTO15294 1046 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 PFKFB2O60825 505 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 ZNF217O75362 1048 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 HLA-EP13747 358 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 PLS3P13797 630 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 EIF2DP41214 584 aaKnown RBP15.48■□□□□ 0.07
VPS29-209ENST00000551655 MATKP42679 507 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 LIG4P49917 911 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
VPS29-209ENST00000551655 LRRC69Q6ZNQ3 347 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 PDCL2Q8N4E4 241 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 NECAB1Q8N987 351 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 FSIP1Q8NA03 581 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
VPS29-209ENST00000551655 SPIRE2Q8WWL2 714 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 WASF1Q92558 559 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 SEMA4CQ9C0C4 833 aa15.48■□□□□ 0.07
VPS29-209ENST00000551655 DDX43Q9NXZ2 648 aaKnown RBP15.48■□□□□ 0.07
VPS29-209ENST00000551655 CPSF3Q9UKF6 684 aaKnown RBP15.48■□□□□ 0.07
VPS29-209ENST00000551655 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 KPNA7A9QM74 516 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 TULP3O75386 442 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 ADH1CP00326 375 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 PAX3P23760 479 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 CDC25AP30304 524 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 NTSR1P30989 418 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 GUCY1B3Q02153 619 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 INTS6LQ5JSJ4 861 aaKnown RBP15.47■□□□□ 0.07
VPS29-209ENST00000551655 WDR45BQ5MNZ6 344 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 KIAA1324Q6UXG2 1013 aaKnown RBP15.47■□□□□ 0.07
VPS29-209ENST00000551655 GPR155Q7Z3F1 870 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 OSTM1Q86WC4 334 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 ETFBKMTQ8IXQ9 262 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
VPS29-209ENST00000551655 CDC6Q99741 560 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 MSTO1Q9BUK6 570 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 CCSER1Q9C0I3 900 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 C17orf75Q9HAS0 396 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 DPP3Q9NY33 737 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 L1RE1Q9UN81 338 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 DNM3Q9UQ16 869 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 SLCO1B1Q9Y6L6 691 aa15.47■□□□□ 0.07
VPS29-209ENST00000551655 A0A1B0GVT2 93 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
VPS29-209ENST00000551655 FLRT2O43155 660 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 JAK2O60674 1132 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 CER1O95813 267 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 ZNF883P0CG24 379 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 KRT10P13645 584 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 ACOT2P49753 483 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 SLC7A9P82251 487 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 PTPRNQ16849 979 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 SLC39A4Q6P5W5 647 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 DBX2Q6ZNG2 339 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 FAM181AQ8N9Y4 354 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 FAM84AQ96KN4 292 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 GPR174Q9BXC1 333 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 ABCB6Q9NP58 842 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 GMIPQ9P107 970 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 PTPN13Q12923 2485 aa15.46■□□□□ 0.07
VPS29-209ENST00000551655 COL6A6A6NMZ7 2263 aa15.45■□□□□ 0.06
VPS29-209ENST00000551655 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.45■□□□□ 0.06
VPS29-209ENST00000551655 TISP43B9A030 160 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms