RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 EIF4A3P38919 411 aaKnown RBP12.21□□□□□ -0.46
SNHG1-206ENST00000537925 ASPAP45381 313 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 CDH8P55286 799 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 NFE2Q16621 373 aaPredicted RBP12.21□□□□□ -0.46
SNHG1-206ENST00000537925 TTC9BQ8N6N2 239 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 NECAB3Q96P71 396 aaPredicted RBP12.21□□□□□ -0.46
SNHG1-206ENST00000537925 UHRF1Q96T88 793 aaPredicted RBP12.21□□□□□ -0.46
SNHG1-206ENST00000537925 SYT15Q9BQS2 421 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 RHOXF2Q9BQY4 288 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 BCO2Q9BYV7 579 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 SNX25Q9H3E2 840 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 DEF6Q9H4E7 631 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 PIDD1Q9HB75 910 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 WDR6Q9NNW5 1121 aaKnown RBP12.21□□□□□ -0.46
SNHG1-206ENST00000537925 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 HYOU1Q9Y4L1 999 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 YIPF1Q9Y548 306 aa12.21□□□□□ -0.46
SNHG1-206ENST00000537925 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 LOC730098B7Z3J9 87 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 H3BQF6 201 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 EPHB6O15197 1021 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 P4HA2O15460 535 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 AKR1B10O60218 316 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
SNHG1-206ENST00000537925 ATP2C2O75185 946 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 LRG1P02750 347 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 PDGFRBP09619 1106 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 TNFRSF8P28908 595 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 RAP1GAPP47736 663 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 CCDC142Q17RM4 750 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 HGSNATQ68CP4 663 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 CACNA2D4Q7Z3S7 1137 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 GRASPQ7Z6J2 395 aaPredicted RBP12.2□□□□□ -0.46
SNHG1-206ENST00000537925 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 NUP210Q8TEM1 1887 aaPredicted RBP12.2□□□□□ -0.46
SNHG1-206ENST00000537925 NIF3L1Q9GZT8 377 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.2□□□□□ -0.461e-323■■■■□ 19.6
SNHG1-206ENST00000537925 FAM207AQ9NSI2 230 aaPredicted RBP12.2□□□□□ -0.46
SNHG1-206ENST00000537925 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 PCDHB5Q9Y5E4 795 aa12.2□□□□□ -0.46
SNHG1-206ENST00000537925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.462e-26■□□□□ 8.9
SNHG1-206ENST00000537925 CLUHO75153 1309 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 TRIOO75962 3097 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 BTNL10A8MVZ5 291 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 A8MXQ7 604 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 ENC1O14682 589 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 HAPLN1P10915 354 aaPredicted RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 TUFMP49411 452 aaKnown RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 TWF1Q12792 350 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 PLD1Q13393 1074 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 MAPRE1Q15691 268 aaKnown RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 C10orf76Q5T2E6 689 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 CREG2Q8IUH2 290 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 MYCBPAPQ8TBZ2 947 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 DPEP3Q9H4B8 488 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 CYP3A43Q9HB55 503 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 CD320Q9NPF0 282 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 PLCB1Q9NQ66 1216 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 AVENQ9NQS1 362 aaPredicted RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 HCFC1R1Q9NWW0 138 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 ABI2Q9NYB9 513 aaPredicted RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
SNHG1-206ENST00000537925 USTQ9Y2C2 406 aa12.19□□□□□ -0.46
SNHG1-206ENST00000537925 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-206ENST00000537925 NOL4O94818 638 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 PTPN2P17706 415 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 PTPN1P18031 435 aaKnown RBP12.18□□□□□ -0.46
SNHG1-206ENST00000537925 ATF6P18850 670 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 MAGEA1P43355 309 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 ALDH1A3P47895 512 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 CDR1P51861 262 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 NTHL1P78549 312 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 CYP27A1Q02318 531 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 GLE1Q53GS7 698 aaKnown RBP12.18□□□□□ -0.46
SNHG1-206ENST00000537925 WDR44Q5JSH3 913 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 SFMBT2Q5VUG0 894 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 UNC93AQ86WB7 457 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 GJD3Q8N144 294 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 B3GALNT2Q8NCR0 500 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 LMO3Q8TAP4 145 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 COG1Q8WTW3 980 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 TATDN2Q93075 761 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 MYLPFQ96A32 169 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
SNHG1-206ENST00000537925 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 NR2E1Q9Y466 385 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms