RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 BMP6P22004 513 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 YWHAQP27348 245 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 SOX9P48436 509 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 MTF1Q14872 753 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 KIAA1958Q8N8K9 716 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 SLC2A14Q8TDB8 520 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 METTL14Q9HCE5 456 aaKnown RBP35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP35.05■■■■□ 3.22e-6■■■■■ 119.2
SSSCA1-205ENST00000527920 SP9P0CG40 484 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 CCDC130P13994 396 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 TCERG1LQ5VWI1 586 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 FRMD5Q7Z6J6 570 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 TWNKQ96RR1 684 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 HNRNPABQ99729 332 aaKnown RBP35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 HPS4Q9NQG7 708 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 ANAPC1Q9H1A4 1944 aa35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 ZFHX2Q9C0A1 2572 aaPredicted RBP35.04■■■■□ 3.2
SSSCA1-205ENST00000527920 FAM92AA1XBS5 289 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 CHRNB1P11230 501 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 SLC5A3P53794 718 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 SLC7A9P82251 487 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 ORC1Q13415 861 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 RUNX3Q13761 415 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 DCAF17Q5H9S7 520 aaPredicted RBP35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 ISM2Q6H9L7 571 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 TTI2Q6NXR4 508 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 C12orf29Q8N999 325 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 WHAMMQ8TF30 809 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 SLC35C1Q96A29 364 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 SEMA4AQ9H3S1 761 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 LMAN1LQ9HAT1 526 aa35.03■■■■□ 3.2
SSSCA1-205ENST00000527920 PPP1R3GB7ZBB8 358 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 OAS1P00973 400 aaKnown RBP35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 LRRC32Q14392 662 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 CBWD6Q4V339 395 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 WDR44Q5JSH3 913 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 CBWD3Q5JTY5 395 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 CBWD5Q5RIA9 395 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 TXNDC11Q6PKC3 985 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 FILIP1Q7Z7B0 1213 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 ZMIZ2Q8NF64 920 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 SH3RF2Q8TEC5 729 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 OSCP1Q8WVF1 389 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 SMOQ99835 787 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 PRMT8Q9NR22 394 aaPredicted RBP35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 FAM49BQ9NUQ9 324 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 MYO15AQ9UKN7 3530 aa35.02■■■■□ 3.2
SSSCA1-205ENST00000527920 BICDL2A1A5D9 508 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 FAM200BP0CF97 657 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 ANP32AP39687 249 aaKnown RBP35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 MTAPQ13126 283 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 DGKKQ5KSL6 1271 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 SNX30Q5VWJ9 437 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 ZC3H14Q6PJT7 736 aaKnown RBP35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 TRIML1Q8N9V2 468 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 NKD2Q969F2 451 aaPredicted RBP35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 FBXO32Q969P5 355 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 DUSP9Q99956 384 aaKnown RBP35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 EBF3Q9H4W6 596 aa35.01■■■■□ 3.2
SSSCA1-205ENST00000527920 PATJQ8NI35 1801 aa35.01■■■■□ 3.19
SSSCA1-205ENST00000527920 ZNF638Q14966 1978 aaKnown RBP35■■■■□ 3.19
SSSCA1-205ENST00000527920 GFRA3O60609 400 aa35■■■■□ 3.19
SSSCA1-205ENST00000527920 AMPD2Q01433 879 aa35■■■■□ 3.19
SSSCA1-205ENST00000527920 TTC8Q8TAM2 541 aa35■■■■□ 3.19
SSSCA1-205ENST00000527920 CYFIP2Q96F07 1278 aa35■■■■□ 3.19
SSSCA1-205ENST00000527920 PNPLA8Q9NP80 782 aa35■■■■□ 3.19
SSSCA1-205ENST00000527920 CD58P19256 250 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 TUBP50607 506 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 TRIM68Q6AZZ1 485 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 SCAMP5Q8TAC9 235 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 NELFBQ8WX92 580 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 ATP2A3Q93084 1043 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 FBXO44Q9H4M3 255 aa34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 DUS2Q9NX74 493 aaKnown RBP34.99■■■■□ 3.19
SSSCA1-205ENST00000527920 PRR23AA6NEV1 266 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 PMM2O15305 246 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 ZDHHC11BP0C7U3 371 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 ARSAP15289 507 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 KLHL10Q6JEL2 608 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 SYNPOQ8N3V7 929 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 CPA6Q8N4T0 437 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 CISHQ9NSE2 258 aa34.98■■■■□ 3.19
SSSCA1-205ENST00000527920 OTOL1A6NHN0 477 aaPredicted RBP34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 BEST1O76090 585 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 IFNAR2P48551 515 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 MAP3K7CLP57077 242 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 IFRD2Q12894 506 aaPredicted RBP34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 CCINQ13939 588 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 CLEC20AQ6ZU45 233 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 RNF38Q9H0F5 515 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 USP34Q70CQ2 3546 aa34.97■■■■□ 3.19
SSSCA1-205ENST00000527920 VPS13AQ96RL7 3174 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 BIN1O00499 593 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 ADORA2BP29275 332 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 ZXDBP98169 803 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 PON2Q15165 354 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 EML3Q32P44 896 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 DDX42Q86XP3 938 aaKnown RBP eCLIP34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 NELL1Q92832 810 aa34.96■■■■□ 3.19
SSSCA1-205ENST00000527920 FAM126AQ9BYI3 521 aaPredicted RBP34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms