RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 PANK4Q9NVE7 773 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 SMPD4Q9NXE4 827 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 UXTQ9UBK9 157 aaPredicted RBP6.26□□□□□ -1.41
GYPB-205ENST00000505583 SEL1LQ9UBV2 794 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 EBF1Q9UH73 591 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ANGPTL2Q9UKU9 493 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ITGA11Q9UKX5 1188 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 ARHGAP26Q9UNA1 814 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 EXOC7Q9UPT5 735 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 WASF3Q9UPY6 502 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PCDHGA5Q9Y5G8 931 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 PLXND1Q9Y4D7 1925 aa6.26□□□□□ -1.41
GYPB-205ENST00000505583 CNOT1A5YKK6 2376 aaKnown RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 LAMA1P25391 3075 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ZNF840PA6NDX5 716 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 C1QTNF9BB2RNN3 333 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 F8VP50 259 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 SGK1O00141 431 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CLDN5O00501 218 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CDX4O14627 284 aaPredicted RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 TGFB1I1O43294 461 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CAVIN2O95810 425 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 OLFM2O95897 454 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 LDHAP00338 332 aaKnown RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 CST3P01034 146 aaPredicted RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 TMEM191BP0C7N4 346 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 C1QTNF9P0C862 333 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 TCF3P15923 654 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 SYT1P21579 422 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 PCSK1P29120 753 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 GBP1P32455 592 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 GRIK1P39086 918 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 STAT6P42226 847 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 MAGEA11P43364 429 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 LHX1P48742 406 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 IRX4P78413 519 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 AMPD2Q01433 879 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CYP27A1Q02318 531 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CUL4AQ13619 759 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 KCNB1Q14721 858 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CRY1Q16526 586 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 MDH1BQ5I0G3 518 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 PMS2CLQ68D20 193 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 RHBDF2Q6PJF5 856 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 DENND5BQ6ZUT9 1274 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 FILIP1Q7Z7B0 1213 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 RASSF3Q86WH2 238 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ADGRG2Q8IZP9 1017 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ALLCQ8N6M5 410 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 TSTD1Q8NFU3 115 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 MYCBPAPQ8TBZ2 947 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 CACTINQ8WUQ7 758 aaKnown RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 RLN3Q8WXF3 142 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 ZNF516Q92618 1163 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 WBP2Q969T9 261 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 FUBP3Q96I24 572 aaKnown RBP eCLIP6.25□□□□□ -1.41
GYPB-205ENST00000505583 SPATA17Q96L03 361 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 FNBP1Q96RU3 617 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 EDEM2Q9BV94 578 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 TTLL2Q9BWV7 592 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ZNF518BQ9C0D4 1074 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 DPEP3Q9H4B8 488 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 TMEM74BQ9NUR3 256 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 MAGEC2Q9UBF1 373 aaPredicted RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 HCN2Q9UL51 889 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.25□□□□□ -1.41
GYPB-205ENST00000505583 CFAP47Q6ZTR5 3102 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 FRYQ5TBA9 3013 aa6.25□□□□□ -1.41
GYPB-205ENST00000505583 ZNF233A6NK53 670 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 C3orf80F5H4A9 247 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 TRIM24O15164 1050 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ADAM23O75077 832 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ABL1P00519 1130 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 OAS1P00973 400 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 WARSP23381 471 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 CASP1P29466 404 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 PTGER3P43115 390 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 KIR2DL1P43626 348 aaPredicted RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 PGFP49763 221 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 NOVA1P51513 510 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 NOP14P78316 857 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 SLC7A9P82251 487 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 TAF10Q12962 218 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MYO1EQ12965 1108 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 SLC39A14Q15043 492 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 DHCR24Q15392 516 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ELF2Q15723 593 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 SH3PXD2AQ5TCZ1 1133 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 VSTM1Q6UX27 236 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 C4orf50Q6ZRC1 276 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 CCDC73Q6ZRK6 1079 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 PAQR9Q6ZVX9 377 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ARMCX6Q7L4S7 300 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 EPM2AIP1Q7L775 607 aaPredicted RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 DPH6Q7L8W6 267 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 TRAPPC11Q7Z392 1133 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms